CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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atf-5
(
Caenorhabditis elegans
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
WBGene00000221
T069394_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
atf-5
M00593_2.00
Caenorhabditis elegans
NKVTGACGTNN
NNACGTCABMN
PBM
Narasimhan et al.(2015)
pTH9911
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.782
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00593_2.00
bZIP
51
114
KTPEKKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFMT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T04C10.4.1
bZIP
136
199
KTPEKKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFMT
T04C10.4.2
bZIP
136
199
KTPEKKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFMT
Links
Other
bZIP
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy