atf-5 (Caenorhabditis elegans)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 WBGene00000221 T069394_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nucleus. Human ortholog(s) of this gene implicated in prostate carcinoma. Orthologous to human ATF4 (activating transcription factor 4) and ATF5 (activating transcription factor 5). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
atf-5
M00593_2.00		 Caenorhabditis elegans
NKVTGACGTNN
NNACGTCABMN		 PBM
Narasimhan et al.(2015)
pTH9911		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00593_2.00 bZIP 51 114

DNA Binding Domains

Protein ID Domain From To Sequence
T04C10.4.1 bZIP 136 199
T04C10.4.2 bZIP 136 199

Links

Other bZIP family TFs
Other Caenorhabditis elegans TFs

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4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action