Alligator_sinensis_CCG003243.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG003243.1 T069836_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CREB3L4
M04293_2.00
Homo sapiens
NRTGACGTCABN

NVTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_1
0.840 0.750
CREB3L4
M04294_2.00
Homo sapiens
NKCCACGTCABN

NVTGACGTGGMN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_2
0.840 0.750
CREB3L4
M04295_2.00
Homo sapiens
NDMVACGTGKMH

DKMCACGTBKHN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_3
0.840 0.750
CREB3L4
M04296_2.00
Homo sapiens
NVTGACRTCAYV

BRTGAYGTCABN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_1
0.840 0.750
CREB3L4
M04297_2.00
Homo sapiens
DGMSACGTGKCR

YGMCACGTSKCH
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_2
0.840 0.750
CREB3L4
M04298_2.00
Homo sapiens
YKCCACRTCAYM

KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_3
0.840 0.750
CREB3
M02829_2.00
Homo sapiens
NNRTGACGTCAYCV

BGRTGACGTCAYNN
SELEX
Jolma et al.(2013)
CREB3_1
0.806 0.672
CREB3
M02830_2.00
Homo sapiens
NDRTGACGTGKMVN

NBKMCACGTCAYHN
SELEX
Jolma et al.(2013)
CREB3_2
0.806 0.672
CREB3
M04239_2.00
Homo sapiens
NRTGACGTGKHN

NDMCACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_1
0.806 0.672
CREB3
M04240_2.00
Homo sapiens
NDMCACGTGGYN

NRCCACGTGKHN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_2
0.806 0.672
CREB3
M04241_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_3
0.806 0.672
CREB3
M04014_2.00
Homo sapiens
GRTGACGTGGMV

BKCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.1
0.806 0.672
CREB3
M04015_2.00
Homo sapiens
VRTGACGTCACB

VGTGACGTCAYB
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.2
0.806 0.672
CREB3
M04242_2.00
Homo sapiens
NKMSACGTSGCV

BGCSACGTSKMN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_1
0.806 0.672
CREB3
M04243_2.00
Homo sapiens
YKCCACRTCAYM

KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_2
0.806 0.672
CREB3
M04244_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_3
0.806 0.672
CREB3L2
M01143_2.00
Monodelphis domestica
NACGTGKH

DMCACGTN
PBM
Lambert et al.(2019)
pTH11415
0.790 0.594
Creb3l2
M01812_2.00
Mus musculus
HCACGTGKM

KMCACGTGD
PBM
Weirauch et al.(2014)
pTH5024
0.790 0.594
Creb3l2
M02863_2.00
Mus musculus
TGRTGACGTGGCA

TGCCACGTCAYCA
SELEX
Jolma et al.(2013)
Creb3l2_1
0.790 0.594
Creb3l2
M02864_2.00
Mus musculus
KGCCACGTGGCA

TGCCACGTGGCM
SELEX
Jolma et al.(2013)
Creb3l2_2
0.790 0.594
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003243.1 bZIP 266 335

Links

Other bZIP family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action