CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007409.1
(
Alligator sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Alligator_sinensis_CCG007409.1
T069849_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CREB3
M02829_2.00
Homo sapiens
NNRTGACGTCAYCV
BGRTGACGTCAYNN
SELEX
Jolma et al.(2013)
CREB3_1
0.840
0.734
CREB3
M02830_2.00
Homo sapiens
NDRTGACGTGKMVN
NBKMCACGTCAYHN
SELEX
Jolma et al.(2013)
CREB3_2
0.840
0.734
CREB3
M04239_2.00
Homo sapiens
NRTGACGTGKHN
NDMCACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_1
0.840
0.734
CREB3
M04240_2.00
Homo sapiens
NDMCACGTGGYN
NRCCACGTGKHN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_2
0.840
0.734
CREB3
M04241_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_3
0.840
0.734
CREB3
M04014_2.00
Homo sapiens
GRTGACGTGGMV
BKCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.1
0.840
0.734
CREB3
M04015_2.00
Homo sapiens
VRTGACGTCACB
VGTGACGTCAYB
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.2
0.840
0.734
CREB3
M04242_2.00
Homo sapiens
NKMSACGTSGCV
BGCSACGTSKMN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_1
0.840
0.734
CREB3
M04243_2.00
Homo sapiens
YKCCACRTCAYM
KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_2
0.840
0.734
CREB3
M04244_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_3
0.840
0.734
Creb3
M10030_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LUMAN_01
0.794
0.688
CREB3L4
M04293_2.00
Homo sapiens
NRTGACGTCABN
NVTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_1
0.790
0.781
CREB3L4
M04294_2.00
Homo sapiens
NKCCACGTCABN
NVTGACGTGGMN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_2
0.790
0.781
CREB3L4
M04295_2.00
Homo sapiens
NDMVACGTGKMH
DKMCACGTBKHN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_3
0.790
0.781
CREB3L4
M04296_2.00
Homo sapiens
NVTGACRTCAYV
BRTGAYGTCABN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_1
0.790
0.781
CREB3L4
M04297_2.00
Homo sapiens
DGMSACGTGKCR
YGMCACGTSKCH
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_2
0.790
0.781
CREB3L4
M04298_2.00
Homo sapiens
YKCCACRTCAYM
KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_3
0.790
0.781
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007409.1
bZIP
142
205
ERLLKRVRRKIRNKQSAQDSRRRKKIYVDGLESRVAACTVQNHELQKKVQLLQKQNMSLLEQLR
Links
Other
bZIP
family TFs
Other
Alligator sinensis
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10002091
Chelonia mydas
Cmyd_10002091
I
0.867
ENSGALG00000002523
Gallus gallus
ENSGALG00000002523
I
0.861
Afo_R001188
Aptenodytes forsteri
Afo_R001188
I
0.861
CREB3
Homo sapiens
ENSG00000107175
D
0.840
ENSNLEG00000004179
Nomascus leucogenys
ENSNLEG00000004179
I
0.838
CREB3
Dasypus novemcinctus
ENSDNOG00000041334
I
0.834
creb3l3l
Tetraodon nigroviridis
ENSTNIG00000016667
I
0.831
Pvit_09828
Pogona vitticeps
Pvit_09828
I
0.818
Myotis_brandtii_CREB3L3_10016301
Myotis brandtii
Myotis_brandtii_CREB3L3_10016301
I
0.812
Alligator_sinensis_CCG003243.1
Alligator sinensis
Alligator_sinensis_CCG003243.1
I
0.812
CREB3L3
Myotis lucifugus
ENSMLUG00000008703
I
0.812
ENSFALG00000000900
Ficedula albicollis
ENSFALG00000000900
I
0.812
ENSAMXG00000011038
Astyanax mexicanus
ENSAMXG00000011038
I
0.809
Alligator_sinensis_CCG001816.1
Alligator sinensis
Alligator_sinensis_CCG001816.1
I
0.806
ENSLOCG00000008658
Lepisosteus oculatus
ENSLOCG00000008658
I
0.806
CREB3L3
Monodelphis domestica
ENSMODG00000000817
I
0.805
CREB3L4
Choloepus hoffmanni
ENSCHOG00000002522
I
0.804
ENSMEUG00000013573
Macropus eugenii
ENSMEUG00000013573
I
0.803
ENSSARG00000004160
Sorex araneus
ENSSARG00000004160
I
0.801
Pvit_02332
Pogona vitticeps
Pvit_02332
I
0.800
Cmyd_10005057
Chelonia mydas
Cmyd_10005057
I
0.800
ENSLACG00000009185
Latimeria chalumnae
ENSLACG00000009185
I
0.797
Ogr06733
Ophisaurus gracilis
Ogr06733
I
0.797
creb3l4
Xenopus tropicalis
XB-GENE-5761389
I
0.795
Creb3
Mus musculus
ENSMUSG00000028466
D
0.794
ENSSTOG00000014516
Ictidomys tridecemlineatus
ENSSTOG00000014516
I
0.792
ENSSARG00000011575
Sorex araneus
ENSSARG00000011575
I
0.791
ENSLOCG00000006221
Lepisosteus oculatus
ENSLOCG00000006221
I
0.791
ENSAMXG00000012038
Astyanax mexicanus
ENSAMXG00000012038
I
0.791
CREB3L4
Pan troglodytes
ENSPTRG00000001368
I
0.790
ENSPPYG00000000792
Pongo abelii
ENSPPYG00000000792
I
0.790
CREB3L4
Pteropus vampyrus
ENSPVAG00000011092
I
0.790
CREB3L4
Procavia capensis
ENSPCAG00000003143
I
0.790
ENSP00000271889
Macaca fascicularis
ENSP00000271889
I
0.790
CREB3L4
Sus scrofa
ENSSSCG00000006560
I
0.790
CREB3L4
Oryctolagus cuniculus
ENSOCUG00000011784
I
0.790
CREB3L4
Echinops telfairi
ENSETEG00000008252
I
0.790
CREB3L4
Felis catus
ENSFCAG00000012586
I
0.790
CREB3L4
Homo sapiens
ENSG00000143578
D
0.790
CREB3L4
Canis familiaris
ENSCAFG00000017395
I
0.790
CREB3L4
Equus caballus
ENSECAG00000017552
I
0.790
Creb3l4
Dipodomys ordii
ENSDORG00000011769
I
0.790
ENSCPOG00000012896
Cavia porcellus
ENSCPOG00000012896
I
0.790
ENSCSAG00000001896
Chlorocebus sabaeus
ENSCSAG00000001896
I
0.790
CREB3L4
Dasypus novemcinctus
ENSDNOG00000042769
I
0.790
ENSPANG00000006363
Papio anubis
ENSPANG00000006363
I
0.790
CREB3L4
Gorilla gorilla
ENSGGOG00000005601
I
0.790
CREB3L4
Callithrix jacchus
ENSCJAG00000009978
I
0.790
CREB3L4
Ochotona princeps
ENSOPRG00000003982
I
0.790
CREB3L4
Macaca mulatta
ENSMMUG00000005008
I
0.790
ENSNLEG00000010798
Nomascus leucogenys
ENSNLEG00000010798
I
0.790
CREB3L4
Microcebus murinus
ENSMICG00000010316
I
0.790
ISCW001814
Ixodes scapularis
ISCW001814
I
0.787
CREB3L4
Bos taurus
ENSBTAG00000014692
I
0.786
ENSP00000271889-D1
Bos grunniens
ENSP00000271889-D1
I
0.786
ENSOARG00000001743
Ovis aries
ENSOARG00000001743
I
0.786
ENSONIG00000015192
Oreochromis niloticus
ENSONIG00000015192
N
0.783
creb3
Xenopus tropicalis
XB-GENE-959045
I
0.782