Alligator_sinensis_CCG007409.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG007409.1 T069849_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CREB3
M02829_2.00
Homo sapiens
NNRTGACGTCAYCV

BGRTGACGTCAYNN
SELEX
Jolma et al.(2013)
CREB3_1
0.840 0.734
CREB3
M02830_2.00
Homo sapiens
NDRTGACGTGKMVN

NBKMCACGTCAYHN
SELEX
Jolma et al.(2013)
CREB3_2
0.840 0.734
CREB3
M04239_2.00
Homo sapiens
NRTGACGTGKHN

NDMCACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_1
0.840 0.734
CREB3
M04240_2.00
Homo sapiens
NDMCACGTGGYN

NRCCACGTGKHN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_2
0.840 0.734
CREB3
M04241_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_HT-SELEX_3
0.840 0.734
CREB3
M04014_2.00
Homo sapiens
GRTGACGTGGMV

BKCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.1
0.840 0.734
CREB3
M04015_2.00
Homo sapiens
VRTGACGTCACB

VGTGACGTCAYB
SELEX
Rodriguez-Martinez et al.(2017)
CREB3.2
0.840 0.734
CREB3
M04242_2.00
Homo sapiens
NKMSACGTSGCV

BGCSACGTSKMN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_1
0.840 0.734
CREB3
M04243_2.00
Homo sapiens
YKCCACRTCAYM

KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_2
0.840 0.734
CREB3
M04244_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB3_FL_Methyl-HT-SELEX_3
0.840 0.734
Creb3
M10030_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LUMAN_01
0.794 0.688
CREB3L4
M04293_2.00
Homo sapiens
NRTGACGTCABN

NVTGACGTCAYN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_1
0.790 0.781
CREB3L4
M04294_2.00
Homo sapiens
NKCCACGTCABN

NVTGACGTGGMN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_2
0.790 0.781
CREB3L4
M04295_2.00
Homo sapiens
NDMVACGTGKMH

DKMCACGTBKHN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_HT-SELEX_3
0.790 0.781
CREB3L4
M04296_2.00
Homo sapiens
NVTGACRTCAYV

BRTGAYGTCABN
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_1
0.790 0.781
CREB3L4
M04297_2.00
Homo sapiens
DGMSACGTGKCR

YGMCACGTSKCH
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_2
0.790 0.781
CREB3L4
M04298_2.00
Homo sapiens
YKCCACRTCAYM

KRTGAYGTGGMR
SELEX
Yin et al.(2017)
CREB3L4_eDBD_Methyl-HT-SELEX_3
0.790 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG007409.1 bZIP 142 205

Links

Other bZIP family TFs
Other Alligator sinensis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R001188 Aptenodytes forsteri Afo_R001188 I 0.861
Alligator_sinensis_CCG001816.1 Alligator sinensis Alligator_sinensis_CCG001816.1 I 0.806
Alligator_sinensis_CCG003243.1 Alligator sinensis Alligator_sinensis_CCG003243.1 I 0.812
Cmyd_10002091 Chelonia mydas Cmyd_10002091 I 0.867
Cmyd_10005057 Chelonia mydas Cmyd_10005057 I 0.800
CREB3 Homo sapiens ENSG00000107175 D 0.840
Creb3 Mus musculus ENSMUSG00000028466 D 0.794
creb3 Xenopus tropicalis XB-GENE-959045 I 0.782
CREB3 Dasypus novemcinctus ENSDNOG00000041334 I 0.834
CREB3L3 Myotis lucifugus ENSMLUG00000008703 I 0.812
CREB3L3 Monodelphis domestica ENSMODG00000000817 I 0.805
creb3l3l Tetraodon nigroviridis ENSTNIG00000016667 I 0.831
CREB3L4 Macaca mulatta ENSMMUG00000005008 I 0.790
CREB3L4 Ochotona princeps ENSOPRG00000003982 I 0.790
CREB3L4 Procavia capensis ENSPCAG00000003143 I 0.790
CREB3L4 Sus scrofa ENSSSCG00000006560 I 0.790
CREB3L4 Pan troglodytes ENSPTRG00000001368 I 0.790
CREB3L4 Pteropus vampyrus ENSPVAG00000011092 I 0.790
CREB3L4 Microcebus murinus ENSMICG00000010316 I 0.790
CREB3L4 Felis catus ENSFCAG00000012586 I 0.790
CREB3L4 Gorilla gorilla ENSGGOG00000005601 I 0.790
creb3l4 Xenopus tropicalis XB-GENE-5761389 I 0.795
CREB3L4 Bos taurus ENSBTAG00000014692 I 0.786
CREB3L4 Canis familiaris ENSCAFG00000017395 I 0.790
CREB3L4 Choloepus hoffmanni ENSCHOG00000002522 I 0.804
CREB3L4 Callithrix jacchus ENSCJAG00000009978 I 0.790
CREB3L4 Dasypus novemcinctus ENSDNOG00000042769 I 0.790
Creb3l4 Dipodomys ordii ENSDORG00000011769 I 0.790
CREB3L4 Equus caballus ENSECAG00000017552 I 0.790
CREB3L4 Echinops telfairi ENSETEG00000008252 I 0.790
CREB3L4 Homo sapiens ENSG00000143578 D 0.790
CREB3L4 Oryctolagus cuniculus ENSOCUG00000011784 I 0.790
ENSAMXG00000011038 Astyanax mexicanus ENSAMXG00000011038 I 0.809
ENSAMXG00000012038 Astyanax mexicanus ENSAMXG00000012038 I 0.791
ENSCPOG00000012896 Cavia porcellus ENSCPOG00000012896 I 0.790
ENSCSAG00000001896 Chlorocebus sabaeus ENSCSAG00000001896 I 0.790
ENSFALG00000000900 Ficedula albicollis ENSFALG00000000900 I 0.812
ENSGALG00000002523 Gallus gallus ENSGALG00000002523 I 0.861
ENSLACG00000009185 Latimeria chalumnae ENSLACG00000009185 I 0.797
ENSLOCG00000006221 Lepisosteus oculatus ENSLOCG00000006221 I 0.791
ENSLOCG00000008658 Lepisosteus oculatus ENSLOCG00000008658 I 0.806
ENSMEUG00000013573 Macropus eugenii ENSMEUG00000013573 I 0.803
ENSNLEG00000004179 Nomascus leucogenys ENSNLEG00000004179 I 0.838
ENSNLEG00000010798 Nomascus leucogenys ENSNLEG00000010798 I 0.790
ENSOARG00000001743 Ovis aries ENSOARG00000001743 I 0.786
ENSONIG00000015192 Oreochromis niloticus ENSONIG00000015192 N 0.783
ENSP00000271889 Macaca fascicularis ENSP00000271889 I 0.790
ENSP00000271889-D1 Bos grunniens ENSP00000271889-D1 I 0.786
ENSPANG00000006363 Papio anubis ENSPANG00000006363 I 0.790
ENSPPYG00000000792 Pongo abelii ENSPPYG00000000792 I 0.790
ENSSARG00000004160 Sorex araneus ENSSARG00000004160 I 0.801
ENSSARG00000011575 Sorex araneus ENSSARG00000011575 I 0.791
ENSSTOG00000014516 Ictidomys tridecemlineatus ENSSTOG00000014516 I 0.792
ISCW001814 Ixodes scapularis ISCW001814 I 0.787
Myotis_brandtii_CREB3L3_10016301 Myotis brandtii Myotis_brandtii_CREB3L3_10016301 I 0.812
Ogr06733 Ophisaurus gracilis Ogr06733 I 0.797
Pvit_02332 Pogona vitticeps Pvit_02332 I 0.800
Pvit_09828 Pogona vitticeps Pvit_09828 I 0.818