Cla022204 (Citrullus lanatus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cla022204 T070052_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20942.1
M01159_2.00 		Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN		 PBM
Lambert et al.(2019)
pTH11276 		0.855 0.963
AT1G06070
M06744_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_col_a 		0.855 0.963
AT1G06070
M06745_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a 		0.855 0.963
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022204 bZIP 220 273

Links

Other bZIP family TFs
Other Citrullus lanatus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.062530 Cucumis sativus Cucsa.062530 I 0.856
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I 0.856
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I 0.855
Cucsa.251880 Cucumis sativus Cucsa.251880 I 0.855
cassava32399.m1 Manihot esculenta cassava32399.m1 I 0.855
AT1G06070 Arabidopsis thaliana AT1G06070 D 0.855
Ca_02692 Cicer arietinum Ca_02692 I 0.855
Cla022201 Citrullus lanatus Cla022201 I 0.855
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I 0.855
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I 0.855
PK20942.1 Cannabis sativa PK20942.1 D 0.855
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I 0.855
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I 0.855
Lus10008150.g Linum usitatissimum Lus10008150.g I 0.855
Carubv10008993m.g Capsella rubella Carubv10008993m.g I 0.855
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I 0.855
TCM_019998 Theobroma cacao TCM_019998 I 0.855
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I 0.855
GLYMA12G05520 Glycine max GLYMA12G05520 I 0.855
GLYMA11G13510 Glycine max GLYMA11G13510 I 0.855
Bo8g005940 Brassica oleracea Bo8g005940 I 0.855
GLYMA15G03350 Glycine max GLYMA15G03350 I 0.855
GLYMA13G42030 Glycine max GLYMA13G42030 I 0.855
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I 0.855
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I 0.855
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I 0.854
MDP0000435971 Malus domestica MDP0000435971 I 0.851
Pm007522 Prunus mume Pm007522 I 0.851
Lus10019376.g Linum usitatissimum Lus10019376.g I 0.848
Bo5g007170 Brassica oleracea Bo5g007170 I 0.844
Bra030637 Brassica rapa Bra030637 I 0.844
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I 0.844
Bra015471 Brassica rapa Bra015471 I 0.844
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I 0.844
OB09G23080 Oryza brachyantha OB09G23080 I 0.842
MLOC_64781 Hordeum vulgare MLOC_64781 I 0.842
OMERI09G12160 Oryza meridionalis OMERI09G12160 I 0.842
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I 0.842
RF2A Oryza sativa OS09G0516200 I 0.842
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I 0.841
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I 0.813
TRIUR3_16287 Triticum urartu TRIUR3_16287 I 0.813
MDP0000234166 Malus domestica MDP0000234166 I 0.807
F775_13434 Aegilops tauschii F775_13434 I 0.784