Cmyd_10007892 (Chelonia mydas)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cmyd_10007892 T070075_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atf4
M00759_2.00
Mus musculus
NNNNKRCDHVHNN

NNDBDHGYMNNNN
PBM
Weirauch et al.(2013)
pTH1014
0.904 0.891
Atf4
M02865_2.00
Mus musculus
DRBATGAYGCAATM

KATTGCRTCATVYH
SELEX
Jolma et al.(2013)
Atf4_1
0.904 0.891
Atf4
M08833_2.00
Mus musculus
DNMTGATGCAAY

RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_MOUSE.H11MO.0.A
0.904 0.891
Atf4
M09496_2.00
Mus musculus
MTGATGYAAY

RTTRCATCAK
Misc
Heinz et al.(2010)
MEF-Atf4_GSE35681
0.904 0.891
ATF4
M02834_2.00
Homo sapiens
DNMTGAYGCAAYM

KRTTGCRTCAKNH
SELEX
Jolma et al.(2013)
ATF4_1
0.904 0.875
ATF4
M04274_2.00
Homo sapiens
RDATGACGTCATHY

RDATGACGTCATHY
SELEX
Yin et al.(2017)
ATF4_eDBD_HT-SELEX
0.904 0.875
ATF4
M04276_2.00
Homo sapiens
RKATGACGTCATMY

RKATGACGTCATMY
SELEX
Yin et al.(2017)
ATF4_FL_HT-SELEX
0.904 0.875
ATF4
M04027_2.00
Homo sapiens
VNATGACGTCABNY

RNVTGACGTCATNB
SELEX
Rodriguez-Martinez et al.(2017)
ATF4.1
0.904 0.875
ATF4
M08796_2.00
Homo sapiens
DNMTGATGCAAY

RTTGCATCAKNH
Misc
Kulakovskiy et al.(2013)
ATF4_HUMAN.H11MO.0.A
0.904 0.875
ATF4
M09963_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q2
0.904 0.875
ATF4
M09964_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q5
0.904 0.875
ATF4
M09965_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF4_Q6
0.904 0.875
ATF4
M04275_2.00
Homo sapiens
RKATGACATCATCY

RGATGATGTCATMY
SELEX
Yin et al.(2017)
ATF4_eDBD_Methyl-HT-SELEX
0.904 0.875
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10007892 bZIP 277 340

Links

Other bZIP family TFs
Other Chelonia mydas TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011605 Calypte anna Aan_R011605 I 0.904
Afo_R007931 Aptenodytes forsteri Afo_R007931 I 0.892
Alligator_sinensis_CCG008004.1 Alligator sinensis Alligator_sinensis_CCG008004.1 I 0.888
ATF4 Oryzias latipes ENSORLG00000013424 I 0.851
ATF4 Procavia capensis ENSPCAG00000004089 I 0.904
ATF4 Pan troglodytes ENSPTRG00000014398 I 0.904
ATF4 Pteropus vampyrus ENSPVAG00000015476 I 0.904
Atf4 Rattus norvegicus ENSRNOG00000017801 I 0.904
ATF4 Homo sapiens ENSG00000128272 D 0.904
ATF4 Anolis carolinensis ENSACAG00000007573 I 0.868
ATF4 Ochotona princeps ENSOPRG00000010583 I 0.876
ATF4 Loxodonta africana ENSLAFG00000012020 I 0.904
ATF4 Ornithorhynchus anatinus ENSOANG00000011026 I 0.914
Atf4 Mus musculus ENSMUSG00000042406 D 0.904
ATF4 Meleagris gallopavo ENSMGAG00000012387 I 0.883
ATF4 Otolemur garnettii ENSOGAG00000033566 I 0.904
ATF4 Felis catus ENSFCAG00000009288 I 0.904
ATF4 Sus scrofa ENSSSCG00000000084 I 0.904
atf4 Xenopus tropicalis XB-GENE-983841 I 0.870
ATF4 Bos taurus ENSBTAG00000017462 I 0.904
ATF4 Canis familiaris ENSCAFG00000001324 I 0.904
ATF4 Choloepus hoffmanni ENSCHOG00000008739 I 0.904
ATF4 Callithrix jacchus ENSCJAG00000002594 I 0.904
ATF4 Cavia porcellus ENSCPOG00000022485 I 0.904
ATF4 Gallus gallus ENSGALG00000012135 I 0.904
ATF4 Tursiops truncatus ENSTTRG00000014581 I 0.904
ATF4 Taeniopygia guttata ENSTGUG00000010225 I 0.904
ATF4 Tupaia belangeri ENSTBEG00000005052 I 0.904
Atf4 Dipodomys ordii ENSDORG00000004952 I 0.904
ATF4 Equus caballus ENSECAG00000006931 I 0.904
ATF4 Monodelphis domestica ENSMODG00000009380 I 0.906
atf4.L Xenopus laevis XB-GENE-983847 I 0.874
atf4.S Xenopus laevis XB-GENE-6251859 I 0.844
atf4a Oryzias latipes ENSORLG00000010649 I 0.835
atf4a Gasterosteus aculeatus ENSGACG00000019842 I 0.847
atf4a Takifugu rubripes ENSTRUG00000001898 I 0.846
atf4a Danio rerio ENSDARG00000039515 I 0.845
atf4a Tetraodon nigroviridis ENSTNIG00000000373 I 0.846
atf4b Danio rerio ENSDARG00000038141 I 0.863
Brh_R011254 Buceros rhinoceros Brh_R011254 I 0.904
ENSAMEG00000010932 Ailuropoda melanoleuca ENSAMEG00000010932 I 0.904
ENSAMXG00000011467 Astyanax mexicanus ENSAMXG00000011467 I 0.859
ENSAPLG00000001773 Anas platyrhynchos ENSAPLG00000001773 I 0.904
ENSBTAP00000023213-D1 Bos grunniens ENSBTAP00000023213-D1 I 0.904
ENSCSAG00000006330 Chlorocebus sabaeus ENSCSAG00000006330 I 0.904
ENSDNOG00000030854 Dasypus novemcinctus ENSDNOG00000030854 I 0.904
ENSDNOG00000046837 Dasypus novemcinctus ENSDNOG00000046837 I 0.904
ENSFALG00000012313 Ficedula albicollis ENSFALG00000012313 I 0.904
ENSGGOG00000010115 Gorilla gorilla ENSGGOG00000010115 I 0.904
ENSGGOG00000024022 Gorilla gorilla ENSGGOG00000024022 I 0.865
ENSGMOG00000014904 Gadus morhua ENSGMOG00000014904 I 0.853
ENSGMOG00000018039 Gadus morhua ENSGMOG00000018039 I 0.874
ENSLACG00000003943 Latimeria chalumnae ENSLACG00000003943 I 0.884
ENSLOCG00000011103 Lepisosteus oculatus ENSLOCG00000011103 I 0.879
ENSMEUG00000011209 Macropus eugenii ENSMEUG00000011209 I 0.904
ENSMICG00000011448 Microcebus murinus ENSMICG00000011448 I 0.904
ENSMLUG00000027798 Myotis lucifugus ENSMLUG00000027798 I 0.893
ENSMMUG00000004499 Macaca mulatta ENSMMUG00000004499 I 0.904
ENSMPUG00000009865 Mustela putorius furo ENSMPUG00000009865 I 0.902
ENSMPUG00000013386 Mustela putorius furo ENSMPUG00000013386 I 0.902
ENSNLEG00000015257 Nomascus leucogenys ENSNLEG00000015257 I 0.904
ENSOARG00000016775 Ovis aries ENSOARG00000016775 I 0.904
ENSONIG00000008552 Oreochromis niloticus ENSONIG00000008552 I 0.855
ENSONIG00000013091 Oreochromis niloticus ENSONIG00000013091 I 0.844
ENSP00000384587 Macaca fascicularis ENSP00000384587 I 0.904
ENSPANG00000025194 Papio anubis ENSPANG00000025194 I 0.904
ENSPFOG00000005452 Poecilia formosa ENSPFOG00000005452 I 0.869
ENSPFOG00000006088 Poecilia formosa ENSPFOG00000006088 I 0.846
ENSPPYG00000011842 Pongo abelii ENSPPYG00000011842 I 0.904
ENSPSIG00000011085 Pelodiscus sinensis ENSPSIG00000011085 I 0.906
ENSSHAG00000014069 Sarcophilus harrisii ENSSHAG00000014069 I 0.906
ENSSTOG00000024459 Ictidomys tridecemlineatus ENSSTOG00000024459 I 0.808
ENSSTOG00000025355 Ictidomys tridecemlineatus ENSSTOG00000025355 I 0.904
ENSSTOG00000025644 Ictidomys tridecemlineatus ENSSTOG00000025644 I 0.795
ENSXMAG00000002653 Xiphophorus maculatus ENSXMAG00000002653 I 0.869
ENSXMAG00000008039 Xiphophorus maculatus ENSXMAG00000008039 I 0.846
Gfo_R004722 Geospiza fortis Gfo_R004722 I 0.904
Myotis_brandtii_ATF4_10014009 Myotis brandtii Myotis_brandtii_ATF4_10014009 I 0.893
Ogr14426 Ophisaurus gracilis Ogr14426 I 0.902
Pvit_04694 Pogona vitticeps Pvit_04694 I 0.888
Tal_R009484 Tyto alba Tal_R009484 I 0.904