Cmyd_10017449 (Chelonia mydas)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cmyd_10017449 T070097_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY

RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.893 0.984
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY

RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.893 0.984
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN

NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.893 0.984
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM

KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.893 0.984
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN

NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.893 0.984
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV

BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.893 0.984
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN

NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.893 0.984
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV

BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.893 0.984
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN

NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.893 0.984
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH

DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.893 0.984
CEBPB
M09995_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.893 0.984
CEBPB
M09996_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.893 0.984
CEBPB
M09997_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.893 0.984
CEBPB
M09998_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.893 0.984
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN

NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.893 0.984
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB

VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.884 0.952
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB

VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.884 0.952
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB

VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.884 0.952
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB

VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.884 0.952
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY

RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.884 0.952
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB

VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.884 0.952
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT

ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.884 0.952
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB

VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.884 0.952
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN

NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.884 0.952
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN

NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.884 0.952
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA

TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.884 0.952
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA

TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.835 0.726
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB

VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.835 0.726
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN

NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.835 0.726
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY

RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.835 0.726
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN

NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.835 0.726
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB

VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.835 0.726
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN

NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.835 0.726
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN

NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.835 0.726
CEBPA
M10025_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.835 0.726
CEBPA
M10026_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.835 0.726
CEBPA
M10027_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.835 0.726
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD

HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.835 0.726
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN

NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.835 0.726
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA

TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.835 0.726
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY

RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.819 0.758
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY

RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.819 0.758
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN

NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.819 0.758
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN

NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.819 0.758
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM

KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.819 0.758
CEBPE
M09927_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.819 0.758
CEBPE
M09928_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.819 0.758
CEBPE
M09929_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.819 0.758
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN

NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.819 0.758
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA

TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.818 0.726
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM

KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.818 0.726
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10017449 bZIP 270 331

Links

Other bZIP family TFs
Other Chelonia mydas TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP26309 Atta cephalotes ACEP26309 I 0.815
ACYPI003971 Acyrthosiphon pisum ACYPI003971 I 0.848
Afo_R013999 Aptenodytes forsteri Afo_R013999 I 0.815
Alligator_sinensis_CCG003052.1 Alligator sinensis Alligator_sinensis_CCG003052.1 I 0.804
CAA76309 Xenopus laevis CAA76309 I 0.853
Cflo_01516--XP_394681.2_APIME Camponotus floridanus Cflo_01516--XP_394681.2_APIME I 0.815
CLEC002077 Cimex lectularius CLEC002077 I 0.845
DAPPUDRAFT_18594 Daphnia pulex DAPPUDRAFT_18594 I 0.803
CEBPE Anolis carolinensis ENSACAG00000007268 I 0.812
CEBPB Anolis carolinensis ENSACAG00000015567 I 0.884
ENSACAG00000022442 Anolis carolinensis ENSACAG00000022442 N 0.791
ENSAMEG00000007625 Ailuropoda melanoleuca ENSAMEG00000007625 I 0.819
ENSAMEG00000008255 Ailuropoda melanoleuca ENSAMEG00000008255 I 0.853
ENSAMEG00000013456 Ailuropoda melanoleuca ENSAMEG00000013456 I 0.893
ENSAMXG00000018723 Astyanax mexicanus ENSAMXG00000018723 I 0.835
ENSAMXG00000026122 Astyanax mexicanus ENSAMXG00000026122 I 0.859
CEBPE Bos taurus ENSBTAG00000005952 I 0.819
ENSCAFG00000007407 Canis familiaris ENSCAFG00000007407 I 0.835
ENSCAFG00000011433 Canis familiaris ENSCAFG00000011433 I 0.819
CEBPB Canis familiaris ENSCAFG00000031326 I 0.893
CEBPB Callithrix jacchus ENSCJAG00000000526 I 0.893
CEBPE Callithrix jacchus ENSCJAG00000008065 I 0.819
ENSCPOG00000000811 Cavia porcellus ENSCPOG00000000811 I 0.893
CEBPE Cavia porcellus ENSCPOG00000014049 I 0.819
ENSCPOG00000023297 Cavia porcellus ENSCPOG00000023297 I 0.835
ENSCSAG00000016086 Chlorocebus sabaeus ENSCSAG00000016086 I 0.819
ENSCSAG00000018515 Chlorocebus sabaeus ENSCSAG00000018515 I 0.835
ENSCSAG00000018746 Chlorocebus sabaeus ENSCSAG00000018746 I 0.893
cebpa Danio rerio ENSDARG00000036074 I 0.857
cebpb Danio rerio ENSDARG00000042725 I 0.835
CEBPA Dasypus novemcinctus ENSDNOG00000041488 I 0.835
CEBPB Dasypus novemcinctus ENSDNOG00000041573 I 0.893
CEBPE Equus caballus ENSECAG00000012883 I 0.819
CEBPE Erinaceus europaeus ENSEEUG00000005848 I 0.819
CEBPE Echinops telfairi ENSETEG00000000035 I 0.796
ENSFALG00000007785 Ficedula albicollis ENSFALG00000007785 I 0.835
ENSFALG00000014081 Ficedula albicollis ENSFALG00000014081 I 0.884
CEBPE Felis catus ENSFCAG00000002334 I 0.819
CEBPE Homo sapiens ENSG00000092067 D 0.819
CEBPB Homo sapiens ENSG00000172216 D 0.893
CEBPA Homo sapiens ENSG00000245848 D 0.835
cebpb Gasterosteus aculeatus ENSGACG00000011827 I 0.813
CEBPB Gallus gallus ENSGALG00000008014 I 0.884
EBP Gallus gallus ENSGALG00000026525 I 0.861
CEBPE Gorilla gorilla ENSGGOG00000007419 I 0.819
CEBPB Gorilla gorilla ENSGGOG00000025010 I 0.893
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I 0.796
ENSGMOG00000019534 Gadus morhua ENSGMOG00000019534 I 0.835
ENSLACG00000002076 Latimeria chalumnae ENSLACG00000002076 I 0.876
ENSLACG00000005924 Latimeria chalumnae ENSLACG00000005924 I 0.842
ENSLAFG00000026180 Loxodonta africana ENSLAFG00000026180 I 0.893
CEBPA Loxodonta africana ENSLAFG00000030435 I 0.835
CEBPE Loxodonta africana ENSLAFG00000031400 I 0.796
ENSLOCG00000017586 Lepisosteus oculatus ENSLOCG00000017586 I 0.857
ENSLOCG00000018358 Lepisosteus oculatus ENSLOCG00000018358 I 0.834
ENSMEUG00000000063 Macropus eugenii ENSMEUG00000000063 I 0.893
ENSMICG00000002591 Microcebus murinus ENSMICG00000002591 I 0.819
CEBPB Myotis lucifugus ENSMLUG00000002060 I 0.893
CEBPE Myotis lucifugus ENSMLUG00000030209 I 0.819
ENSMMUG00000004874 Macaca mulatta ENSMMUG00000004874 I 0.893
CEBPA Macaca mulatta ENSMMUG00000006124 I 0.835
CEBPE Macaca mulatta ENSMMUG00000019652 I 0.819
CEBPE Monodelphis domestica ENSMODG00000004586 I 0.818
ENSMODG00000016314 Monodelphis domestica ENSMODG00000016314 I 0.893
ENSMPUG00000006815 Mustela putorius furo ENSMPUG00000006815 I 0.819
ENSMPUG00000007593 Mustela putorius furo ENSMPUG00000007593 I 0.835
ENSMPUG00000019019 Mustela putorius furo ENSMPUG00000019019 I 0.893
Cebpa Mus musculus ENSMUSG00000034957 D 0.835
Cebpe Mus musculus ENSMUSG00000052435 D 0.818
Cebpb Mus musculus ENSMUSG00000056501 D 0.884
ENSNLEG00000014958 Nomascus leucogenys ENSNLEG00000014958 I 0.819
ENSOANG00000007645 Ornithorhynchus anatinus ENSOANG00000007645 I 0.819
CEBPA Ornithorhynchus anatinus ENSOANG00000008144 I 0.835
ENSOARG00000004414 Ovis aries ENSOARG00000004414 I 0.853
ENSOARG00000013395 Ovis aries ENSOARG00000013395 I 0.893
ENSOARG00000019360 Ovis aries ENSOARG00000019360 I 0.819
CEBPE Oryctolagus cuniculus ENSOCUG00000022235 I 0.819
CEBPB Oryctolagus cuniculus ENSOCUG00000024667 I 0.893
CEBPE Otolemur garnettii ENSOGAG00000001312 I 0.819
CEBPA Otolemur garnettii ENSOGAG00000024661 I 0.835
CEBPB Otolemur garnettii ENSOGAG00000026467 I 0.893
ENSONIG00000003300 Oreochromis niloticus ENSONIG00000003300 I 0.849
ENSONIG00000021137 Oreochromis niloticus ENSONIG00000021137 I 0.835
cebpb Oryzias latipes ENSORLG00000015032 I 0.835
cebpa Oryzias latipes ENSORLG00000018660 I 0.845
ENSP00000206513 Macaca fascicularis ENSP00000206513 I 0.819
ENSP00000206513-D1 Bos grunniens ENSP00000206513-D1 I 0.819
ENSPANG00000002974 Papio anubis ENSPANG00000002974 I 0.835
ENSPANG00000007537 Papio anubis ENSPANG00000007537 I 0.893
ENSPANG00000019646 Papio anubis ENSPANG00000019646 I 0.819
CEBPE Procavia capensis ENSPCAG00000015039 I 0.796
ENSPFOG00000019930 Poecilia formosa ENSPFOG00000019930 I 0.849
ENSPFOG00000020954 Poecilia formosa ENSPFOG00000020954 I 0.835
ENSPPYG00000005659 Pongo abelii ENSPPYG00000005659 I 0.819
ENSPPYG00000011124 Pongo abelii ENSPPYG00000011124 I 0.893
ENSPSIG00000000363 Pelodiscus sinensis ENSPSIG00000000363 I 0.835
CEBPE Pan troglodytes ENSPTRG00000006162 I 0.819
CEBPA Pan troglodytes ENSPTRG00000038687 I 0.835
CEBPB Pan troglodytes ENSPTRG00000041263 I 0.893
CEBPB Pteropus vampyrus ENSPVAG00000003541 I 0.893
Cebpa Rattus norvegicus ENSRNOG00000010918 I 0.835
Cebpe Rattus norvegicus ENSRNOG00000014282 I 0.818
Cebpb Rattus norvegicus ENSRNOG00000057347 I 0.893
ENSSHAG00000013989 Sarcophilus harrisii ENSSHAG00000013989 I 0.818
ENSSHAG00000014918 Sarcophilus harrisii ENSSHAG00000014918 I 0.835
CEBPE Sus scrofa ENSSSCG00000002033 I 0.819
CEBPA Sus scrofa ENSSSCG00000002866 I 0.835
ENSSSCG00000024816 Sus scrofa ENSSSCG00000024816 I 0.893
ENSSSCG00000028739 Sus scrofa ENSSSCG00000028739 I 0.893
ENSSTOG00000007204 Ictidomys tridecemlineatus ENSSTOG00000007204 I 0.819
ENSTBEG00000017246 Tupaia belangeri ENSTBEG00000017246 I 0.819
CEBPB Taeniopygia guttata ENSTGUG00000008707 I 0.884
CEBPA Taeniopygia guttata ENSTGUG00000009472 I 0.835
cebpa Tetraodon nigroviridis ENSTNIG00000003102 I 0.876
cebpa Takifugu rubripes ENSTRUG00000006383 I 0.884
cebpb Takifugu rubripes ENSTRUG00000007449 I 0.835
CEBPB Tursiops truncatus ENSTTRG00000003985 I 0.893
CEBPE Tursiops truncatus ENSTTRG00000017229 I 0.819
ENSXMAG00000019665 Xiphophorus maculatus ENSXMAG00000019665 I 0.835
ENSXMAG00000019692 Xiphophorus maculatus ENSXMAG00000019692 I 0.836
GB44204 Apis mellifera GB44204 I 0.815
HHAL004160-PA Halyomorpha halys HHAL004160-PA I 0.845
Hsal_02456--XP_394681.2_APIME Harpegnathos saltator Hsal_02456--XP_394681.2_APIME I 0.819
L798_13978 Zootermopsis nevadensis L798_13978 I 0.864
LDEC017703 Leptinotarsa decemlineata LDEC017703 I 0.843
Myotis_brandtii_CEBPE_10009435 Myotis brandtii Myotis_brandtii_CEBPE_10009435 I 0.819
NV14868 Nasonia vitripennis NV14868 I 0.819
Ogr04140 Ophisaurus gracilis Ogr04140 I 0.793
Ogr08265 Ophisaurus gracilis Ogr08265 I 0.812
Ogr08532 Ophisaurus gracilis Ogr08532 I 0.884
PHUM433250 Pediculus humanus PHUM433250 I 0.864
Pvit_03335 Pogona vitticeps Pvit_03335 I 0.883
SINV13631 Solenopsis invicta SINV13631 I 0.812
TC009220 Tribolium castaneum TC009220 I 0.843
cebpa.S Xenopus laevis XB-GENE-17335551 I 0.828
cebpb Xenopus tropicalis XB-GENE-479779 I 0.879
cebpa Xenopus tropicalis XB-GENE-853397 I 0.836
cebpe Xenopus tropicalis XB-GENE-853430 I 0.806
cebpa.L Xenopus laevis XB-GENE-855405 I 0.828
cebpb.L Xenopus laevis XB-GENE-865306 I 0.875
YQE_11799 Dendroctonus ponderosae YQE_11799 I 0.843