ENSBTAP00000011265-D1 (Bos grunniens)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 ENSBTAP00000011265-D1 T070119_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN

NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.929 0.984
Atf3
M01807_2.00
Mus musculus
GATGACGY

RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.929 0.984
Atf3
M08825_2.00
Mus musculus
VTGACTCAB

VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.929 0.984
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.881 0.742
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB

VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.881 0.742
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.881 0.742
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN

NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.881 0.742
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV

BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.881 0.742
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.881 0.742
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN

NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.881 0.742
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN

NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.881 0.742
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN

NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.881 0.742
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN

NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.881 0.742
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN

NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.881 0.742
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN

NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.881 0.742
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN

NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.879 0.742
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW

WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.879 0.742
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.879 0.742
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN

NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.879 0.742
Jdp2
M10033_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.879 0.742
ATF3
M04321_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX
0.823 0.532
ATF3
M04323_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX
0.823 0.532
ATF3
M04032_2.00
Homo sapiens
RTGACGTCAK

MTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1
0.823 0.532
ATF3
M04033_2.00
Homo sapiens
RTGACTCAY

RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2
0.823 0.532
ATF3
M07822_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha
0.823 0.532
ATF3
M07823_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha
0.823 0.532
ATF3
M07824_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha
0.823 0.532
ATF3
M07825_2.00
Homo sapiens
VRTSACGTVR

YBACGTSAYB
ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard
0.823 0.532
ATF3
M08187_2.00
Homo sapiens
GTCACGTG

CACGTGAC
ChIP-seq
Contrino et al.(2012)
Mv41
0.823 0.532
ATF3
M08188_2.00
Homo sapiens
NRTGASTCAY

RTGASTCAYN
ChIP-seq
Contrino et al.(2012)
Mv43
0.823 0.532
ATF3
M08801_2.00
Homo sapiens
RRTSACGTVRB

VYBACGTSAYY
Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A
0.823 0.532
ATF3
M09489_2.00
Homo sapiens
NVTGASTCABNN

NNVTGASTCABN
Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912
0.823 0.532
ATF3
M09977_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_02
0.823 0.532
ATF3
M09978_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_05
0.823 0.532
ATF3
M09979_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_01
0.823 0.532
ATF3
M09980_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_02
0.823 0.532
ATF3
M09981_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6
0.823 0.532
ATF3
M04322_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX
0.823 0.532
ATF3
M04324_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX
0.823 0.532
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN

NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.789 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000011265-D1 bZIP 84 145

Links

Other bZIP family TFs
Other Bos grunniens TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29929.m004704 Ricinus communis 29929.m004704 D 0.000
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.000
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.000
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.000
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.000
Bo2g138840 Brassica oleracea Bo2g138840 I 0.000
Bo5g017510 Brassica oleracea Bo5g017510 I 0.000
Bo8g107400 Brassica oleracea Bo8g107400 I 0.000
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.000
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.000
Bra019721 Brassica rapa Bra019721 I 0.000
Bra026903 Brassica rapa Bra026903 I 0.000
Bra036354 Brassica rapa Bra036354 I 0.000
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.000
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.000
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.000
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.000
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.000
Ca_11315 Cicer arietinum Ca_11315 I 0.000
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.000
Cla023054 Citrullus lanatus Cla023054 I 0.000
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.000
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.000
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.000
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.000
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.000
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.000
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.000
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.000
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.000
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.000
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.000
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.000
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.000
GT-1 Arabidopsis thaliana AT1G13450 D 0.000
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.000
GT-4 Arabidopsis thaliana AT3G25990 D 0.000
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.000
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.000
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.000
MDP0000164819 Malus domestica MDP0000164819 D 0.000
MDP0000275412 Malus domestica MDP0000275412 I 0.000
mgf016368m Mimulus guttatus mgf016368m I 0.000
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.000
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.000
OB04G23970 Oryza brachyantha OB04G23970 I 0.000
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.000
OS04G0486400 Oryza sativa OS04G0486400 D 0.000
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.000
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.000
PK20543.1 Cannabis sativa PK20543.1 D 0.000
Pm006885 Prunus mume Pm006885 I 0.000
Pm016214 Prunus mume Pm016214 I 0.000
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.000
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.000
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.000
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.000
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.000
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.000
Si010147m.g Setaria italica Si010147m.g I 0.000
Si036121m.g Setaria italica Si036121m.g I 0.000
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.000
TCM_010751 Theobroma cacao TCM_010751 I 0.000
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.000
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.000
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.000
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.000
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.000