TF Information

Q41109_PHAVU *(Phaseolus vulgaris)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00170 (bZIP_1)	IPR011616	Q41109_PHAVU	T070488_2.00	HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q41109_PHAVU M10078_2.00	Phaseolus vulgaris	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ROM_Q2	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q40645_ORYSA M10050_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$OSBZ8_Q6	0.884	0.781
PK09653.1 M01156_2.00	Cannabis sativa	NNMCASVNNN	NNNBSTGKNN	PBM Lambert et al.(2019) pTH10114	0.872	0.766
GBF2 M01781_2.00	Arabidopsis thaliana	BMCASSNNN	NNNSSTGKV	PBM Weirauch et al.(2014) pTH7258	0.863	0.672
GBF3 M01779_2.00	Arabidopsis thaliana	NBMCASSTVD	HBASSTGKVN	PBM Weirauch et al.(2014) pTH7328	0.854	0.781
GBF3 M06770_2.00	Arabidopsis thaliana	DNHDNHSACGTGKMD	HKMCACGTSDNHDNH	Dap-seq OMalley et al.(2016) GBF3_colamp	0.854	0.781
GBF3 M06771_2.00	Arabidopsis thaliana	DDWKVYSACGTGGCA	TGCCACGTSRBMWHH	Dap-seq OMalley et al.(2016) GBF3_col	0.854	0.781
TAF1_TOBAC M10079_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TAF1_01	0.839	0.734
TAF1_TOBAC M10080_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TAF1_Q2	0.839	0.734
GBF1 M01783_2.00	Arabidopsis thaliana	HBACGTGKMN	NKMCACGTVD	PBM Weirauch et al.(2014) pTH7259	0.829	0.594
GBF1 M09913_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GBF1_01	0.829	0.594
GBF1 M09914_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GBF1F_Q2	0.829	0.594
GBF1 M09915_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GBF1_Q2_01	0.829	0.594
GBF1 M09916_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GBF1_Q2	0.829	0.594
BZIP68 M01770_2.00	Arabidopsis thaliana	BMCASGBND	HNVCSTGKV	PBM Weirauch et al.(2014) pTH8192	0.807	0.641
BZIP68 M06752_2.00	Arabidopsis thaliana	DNWKNHSACGTGGCR	YGCCACGTSDNMWNH	Dap-seq OMalley et al.(2016) bZIP68_col_a	0.807	0.641
CPRF1_PETCR M10066_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CPRF1_01	0.805	0.703
CPRF1_PETCR M10067_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CPRF1_Q2	0.805	0.703
CPRF1_PETCR M10068_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CPRF_Q2	0.805	0.703
BZIP16 M06764_2.00	Arabidopsis thaliana	DDWKVYSACGTGGCA	TGCCACGTSRBMWHH	Dap-seq OMalley et al.(2016) bZIP16_colamp_a	0.801	0.609
BZIP16 M06765_2.00	Arabidopsis thaliana	DDWKVHSACGTGGCA	TGCCACGTSDBMWHH	Dap-seq OMalley et al.(2016) bZIP16_col_v3a	0.801	0.609
PK23964.1 M01160_2.00	Cannabis sativa	DNKMCACGTV	BACGTGKMNH	PBM Lambert et al.(2019) pTH10151	0.792	0.578
CPRF3_PETCR M10071_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CPRF3_01	0.792	0.531
CPRF3_PETCR M10072_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CPRF3_Q2	0.792	0.531
EmBP-1 M02659_2.00	Triticum aestivum	CCACGTSW	WSACGTGG	SELEX Mathelier et al.(2014) MA0128.1	0.785	0.688
EMBP1_WHEAT M09921_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EMBP1_02	0.785	0.688
EMBP1_WHEAT M09922_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EMBP1_Q2	0.785	0.688
For this family, TFs with SR scores > 0.782* will likely have a similar motif*