TGA1A (Nicotiana sp.)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 TGA1A_TOBAC T070490_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1A
M02662_2.00		 Nicotiana sp.
TGACGTD
HACGTCA		 SELEX
Mathelier et al.(2014)
MA0129.1		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1A_TOBAC
M10081_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2_01 		0.794 1.000
TGA1A_TOBAC
M10082_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2 		0.794 1.000
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TGA1A_TOBAC bZIP 71 120

Links

Other bZIP family TFs
Other Nicotiana sp. TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA1A_TOBAC Nicotiana tabacum TGA1A_TOBAC D 0.794
Solyc04g011670.2 Solanum lycopersicum Solyc04g011670.2 I 0.792
PGSC0003DMG400006345 Solanum tuberosum PGSC0003DMG400006345 I 0.792
Gorai.007G243200 Gossypium raimondii Gorai.007G243200 I 0.786
Pm002037 Prunus mume Pm002037 I 0.784
PRUPE_ppa007578mg Prunus persica PRUPE_ppa007578mg I 0.784
Cucsa.201510 Cucumis sativus Cucsa.201510 I 0.783
PGSC0003DMG400012792 Solanum tuberosum PGSC0003DMG400012792 I 0.783
Cla014729 Citrullus lanatus Cla014729 I 0.783
Solyc04g054320.2 Solanum lycopersicum Solyc04g054320.2 I 0.783
PK11776.1 Cannabis sativa PK11776.1 I 0.782
VIT_07s0031g01320 Vitis vinifera VIT_07s0031g01320 I 0.782