29889.m003420 (Ricinus communis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 29889.m003420 T070518_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HYH
M01132_2.00 		Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN		 PBM
Lambert et al.(2019)
pTH9959 		0.813 0.844
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29889.m003420 bZIP 89 152

Links

Other bZIP family TFs
Other Ricinus communis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B02198 Eucalyptus grandis Eucgr.B02198 I 0.846
SapurV1A.1258s0140 Salix purpurea SapurV1A.1258s0140 I 0.840
SapurV1A.2641s0040 Salix purpurea SapurV1A.2641s0040 I 0.840
SapurV1A.0264s0450 Salix purpurea SapurV1A.0264s0450 I 0.840
PRUPE_ppa011967mg Prunus persica PRUPE_ppa011967mg I 0.837
Pm007163 Prunus mume Pm007163 I 0.837
POPTR_0010s00680 Populus trichocarpa POPTR_0010s00680 I 0.837
MDP0000834642 Malus domestica MDP0000834642 I 0.830
MDP0000279891 Malus domestica MDP0000279891 N 0.828
Bo5g122830 Brassica oleracea Bo5g122830 I 0.815
cassava328.valid.m1 Manihot esculenta cassava328.valid.m1 I 0.815
Ca_22618 Cicer arietinum Ca_22618 I 0.815
GLYMA16G13570 Glycine max GLYMA16G13570 I 0.814
GLYMA03G18990 Glycine max GLYMA03G18990 I 0.814
Bostr.19424s0909 Boechera stricta Bostr.19424s0909 I 0.813
Bra001671 Brassica rapa Bra001671 I 0.813
Cagra.4396s0065 Capsella grandiflora Cagra.4396s0065 I 0.813
Bo3g069000 Brassica oleracea Bo3g069000 I 0.813
HYH Arabidopsis thaliana AT3G17609 D 0.813
HYH Arabidopsis lyrata fgenesh2_kg.3__1938__AT3G17609.2 I 0.813
Thhalv10021704m.g Eutrema salsugineum Thhalv10021704m.g I 0.813
Bra021258 Brassica rapa Bra021258 I 0.813
gene22776-v1.0-hybrid Fragaria vesca gene22776-v1.0-hybrid N 0.810
evm.TU.supercontig_146.5 Carica papaya evm.TU.supercontig_146.5 N 0.805
MTR_7g057160 Medicago truncatula MTR_7g057160 I 0.802
BRADI1G36750 Brachypodium distachyon BRADI1G36750 I 0.798
SapurV1A.0043s0530 Salix purpurea SapurV1A.0043s0530 I 0.795
Cucsa.310450 Cucumis sativus Cucsa.310450 I 0.795
Bra022225 Brassica rapa Bra022225 I 0.793
OBART06G20230 Oryza barthii OBART06G20230 I 0.792
BGIOSGA023213 Oryza indica BGIOSGA023213 I 0.792
OMERI06G20830 Oryza meridionalis OMERI06G20830 I 0.792
OPUNC06G18440 Oryza punctata OPUNC06G18440 I 0.792
OGLUM06G21280 Oryza glumaepatula OGLUM06G21280 I 0.792
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I 0.791
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I 0.791
Sb10g023420 Sorghum bicolor Sb10g023420 I 0.787
GRMZM2G140355 Zea mays GRMZM2G140355 I 0.787
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I 0.787
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I 0.787
HYH Vitis vinifera VIT_05s0020g01090 N 0.782
SapurV1A.3812s0010 Salix purpurea SapurV1A.3812s0010 I 0.782