29955.m001177 (Ricinus communis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 29955.m001177 T070522_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.784 0.571
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.784 0.571
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.784 0.571
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.784 0.571
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.784 0.571
PK24978.1
M01162_2.00 		Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN		 PBM
Lambert et al.(2019)
pTH10153 		0.783 0.540
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29955.m001177 bZIP 147 210

Links

Other bZIP family TFs
Other Ricinus communis TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.864
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I 0.856
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.829
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.822
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.819
Pm004043 Prunus mume Pm004043 I 0.818
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I 0.818
PK16522.1 Cannabis sativa PK16522.1 N 0.817
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.816
Cla000389 Citrullus lanatus Cla000389 I 0.815
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I 0.815
GLYMA08G19590 Glycine max GLYMA08G19590 N 0.814
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.813
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I 0.813
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.812
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.812
MDP0000198495 Malus domestica MDP0000198495 I 0.812
MDP0000706379 Malus domestica MDP0000706379 I 0.811
TCM_006432 Theobroma cacao TCM_006432 I 0.810
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.810
mgf008848m Mimulus guttatus mgf008848m N 0.810
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.810
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I 0.808
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.806
PK22350.1 Cannabis sativa PK22350.1 N 0.802
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.801
Ca_04375 Cicer arietinum Ca_04375 N 0.801
mgf009464m Mimulus guttatus mgf009464m N 0.799
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.797
TCM_035623 Theobroma cacao TCM_035623 N 0.797
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.797
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.797
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.797
chr6.CM0314.840.nd Lotus japonicus chr6.CM0314.840.nd N 0.796
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.795
Bra007274 Brassica rapa Bra007274 I 0.795
Bo8g091160 Brassica oleracea Bo8g091160 I 0.795
Bra007276 Brassica rapa Bra007276 I 0.795
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.795
Bra014668 Brassica rapa Bra014668 I 0.795
Bo6g072380 Brassica oleracea Bo6g072380 I 0.795
Bra003253 Brassica rapa Bra003253 I 0.795
Bo4g112690 Brassica oleracea Bo4g112690 I 0.795
Si001731m.g Setaria italica Si001731m.g I 0.792
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.790
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.790
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.790
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.790
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.789
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.789
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.788
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N 0.788
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.788
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.788
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.788
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.788
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.787
F775_28711 Aegilops tauschii F775_28711 I 0.787
F775_17024 Aegilops tauschii F775_17024 I 0.787
OB01G43630 Oryza brachyantha OB01G43630 I 0.786
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.785
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I 0.785
Pavir.J38875 Panicum virgatum Pavir.J38875 I 0.785
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.785
Si002173m.g Setaria italica Si002173m.g I 0.785
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.785
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.785
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.784
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I 0.784
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.784
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.784
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.784
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.784
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.784
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.784
DPBF3 Arabidopsis thaliana AT3G56850 D 0.784
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.784
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.784
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.784
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.784
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.784
TCM_044596 Theobroma cacao TCM_044596 I 0.784
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.784
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.784
OB05G28440 Oryza brachyantha OB05G28440 I 0.783
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.783
OBART05G21000 Oryza barthii OBART05G21000 I 0.783
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.783
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.783
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.783
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.783
mgf011003m Mimulus guttatus mgf011003m I 0.783
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.783
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N 0.783
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.783
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.783
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.783
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.783
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.783
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.783
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.783
PK24978.1 Cannabis sativa PK24978.1 D 0.783
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.783
OS05G0489700 Oryza sativa OS05G0489700 I 0.783
OS01G0813100 Oryza sativa OS01G0813100 I 0.783
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.783
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.783
MDP0000273211 Malus domestica MDP0000273211 I 0.783
BGIOSGA000613 Oryza indica BGIOSGA000613 I 0.783
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.783
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.783
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.783
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I 0.782
BGIOSGA010835 Oryza indica BGIOSGA010835 I 0.782
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.782
GLYMA15G05440 Glycine max GLYMA15G05440 N 0.782
F775_31964 Aegilops tauschii F775_31964 I 0.782
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.782
OBART01G34790 Oryza barthii OBART01G34790 I 0.782
ONIVA03G16560 Oryza nivara ONIVA03G16560 I 0.782
ONIVA01G39770 Oryza nivara ONIVA01G39770 I 0.782
Ca_23748 Cicer arietinum Ca_23748 I 0.782
OPUNC01G33790 Oryza punctata OPUNC01G33790 I 0.782
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I 0.782
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I 0.782
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I 0.782
Si022639m.g Setaria italica Si022639m.g I 0.782
OMERI03G14020 Oryza meridionalis OMERI03G14020 I 0.782
Cla013878 Citrullus lanatus Cla013878 I 0.782
Carubv10018770m.g Capsella rubella Carubv10018770m.g I 0.782
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.782
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.782
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I 0.782
OLONG_002030 Oryza longistaminata OLONG_002030 I 0.782
OMERI01G32080 Oryza meridionalis OMERI01G32080 I 0.782
Pm016826 Prunus mume Pm016826 I 0.782
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.782
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.782