29955.m001177 (Ricinus communis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 29955.m001177 T070522_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.784 0.571
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.784 0.571
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.784 0.571
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.784 0.571
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.784 0.571
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN

NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.783 0.540
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29955.m001177 bZIP 147 210

Links

Other bZIP family TFs
Other Ricinus communis TFs

Invalid Input OrderBy

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action