CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.184670
(
Cucumis sativus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cucsa.184670
T070666_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.785
0.544
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.793
0.516
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.785
0.544
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.785
0.544
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.786
0.620
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.786
0.620
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.184670.1
bZIP
184
240
KATQQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREEVPLNEICV
Cucsa.184670.2
bZIP
184
248
KATQQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREEAEHIKERSKQLKKKLI
Cucsa.184670.3
bZIP
184
248
KATQQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREELKKKLIPISEKRRPQR
Cucsa.184670.4
bZIP
184
245
KATQQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREEAEHIKERSKQVCT
Cucsa.184670.5
bZIP
184
233
KATQQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREED
Links
Other
bZIP
family TFs
Other
Cucumis sativus
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy