CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.76.135.1
(
Branchiostoma floridae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
e_gw.76.135.1
T070753_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.795
0.661
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.795
0.661
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.795
0.661
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.795
0.661
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.795
0.661
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.795
0.661
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.795
0.661
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.795
0.661
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.795
0.661
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.795
0.661
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.795
0.661
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.795
0.661
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.795
0.661
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.795
0.661
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.786
0.678
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.786
0.678
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.786
0.678
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.786
0.678
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.786
0.678
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.786
0.678
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.786
0.678
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.786
0.678
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.786
0.678
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.786
0.678
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.786
0.678
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.786
0.678
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.786
0.678
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.786
0.678
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.786
0.678
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.786
0.678
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.786
0.678
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.786
0.678
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.786
0.678
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.786
0.678
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.786
0.678
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.786
0.678
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.786
0.678
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.786
0.678
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.786
0.678
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.786
0.678
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.76.135.1
bZIP
8
66
YTTRRQRNNVAVRKSREKAKQRNLETQQKVQELQQENEKLQKRVELLTKELDTLKSLFT
Links
Other
bZIP
family TFs
Other
Branchiostoma floridae
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLACG00000005924
Latimeria chalumnae
ENSLACG00000005924
I
0.798
ENSOARG00000004414
Ovis aries
ENSOARG00000004414
I
0.795
CEBPA
Otolemur garnettii
ENSOGAG00000024661
I
0.795
CEBPA
Ornithorhynchus anatinus
ENSOANG00000008144
I
0.795
CEBPA
Macaca mulatta
ENSMMUG00000006124
I
0.795
CEBPA
Loxodonta africana
ENSLAFG00000030435
I
0.795
ENSPANG00000002974
Papio anubis
ENSPANG00000002974
I
0.795
Cebpa
Mus musculus
ENSMUSG00000034957
D
0.795
ENSPSIG00000000363
Pelodiscus sinensis
ENSPSIG00000000363
I
0.795
CEBPA
Taeniopygia guttata
ENSTGUG00000009472
I
0.795
Afo_R013999
Aptenodytes forsteri
Afo_R013999
I
0.795
cebpa
Xenopus tropicalis
XB-GENE-853397
I
0.795
CEBPA
Sus scrofa
ENSSSCG00000002866
I
0.795
ENSSHAG00000014918
Sarcophilus harrisii
ENSSHAG00000014918
I
0.795
CEBPA
Pan troglodytes
ENSPTRG00000038687
I
0.795
Cebpa
Rattus norvegicus
ENSRNOG00000010918
I
0.795
EBP
Gallus gallus
ENSGALG00000026525
I
0.795
ENSMPUG00000007593
Mustela putorius furo
ENSMPUG00000007593
I
0.795
ENSCAFG00000007407
Canis familiaris
ENSCAFG00000007407
I
0.795
ENSCPOG00000023297
Cavia porcellus
ENSCPOG00000023297
I
0.795
ENSFALG00000007785
Ficedula albicollis
ENSFALG00000007785
I
0.795
ENSCSAG00000018515
Chlorocebus sabaeus
ENSCSAG00000018515
I
0.795
CEBPA
Dasypus novemcinctus
ENSDNOG00000041488
I
0.795
CEBPA
Homo sapiens
ENSG00000245848
D
0.795
ENSAMEG00000008255
Ailuropoda melanoleuca
ENSAMEG00000008255
I
0.795
cebpa.L
Xenopus laevis
XB-GENE-855405
I
0.787
ENSCPOG00000000811
Cavia porcellus
ENSCPOG00000000811
I
0.786
CEBPB
Pteropus vampyrus
ENSPVAG00000003541
I
0.786
CEBPB
Pan troglodytes
ENSPTRG00000041263
I
0.786
Cebpb
Rattus norvegicus
ENSRNOG00000057347
I
0.786
ENSPPYG00000011124
Pongo abelii
ENSPPYG00000011124
I
0.786
ENSSSCG00000024816
Sus scrofa
ENSSSCG00000024816
I
0.786
CEBPB
Tursiops truncatus
ENSTTRG00000003985
I
0.786
ENSAMEG00000013456
Ailuropoda melanoleuca
ENSAMEG00000013456
I
0.786
Ogr08532
Ophisaurus gracilis
Ogr08532
I
0.786
CEBPB
Taeniopygia guttata
ENSTGUG00000008707
I
0.786
ENSSSCG00000028739
Sus scrofa
ENSSSCG00000028739
I
0.786
CEBPB
Canis familiaris
ENSCAFG00000031326
I
0.786
ENSPANG00000007537
Papio anubis
ENSPANG00000007537
I
0.786
CEBPB
Callithrix jacchus
ENSCJAG00000000526
I
0.786
CEBPB
Otolemur garnettii
ENSOGAG00000026467
I
0.786
ENSMMUG00000004874
Macaca mulatta
ENSMMUG00000004874
I
0.786
CEBPB
Homo sapiens
ENSG00000172216
D
0.786
ENSCSAG00000018746
Chlorocebus sabaeus
ENSCSAG00000018746
I
0.786
CEBPB
Myotis lucifugus
ENSMLUG00000002060
I
0.786
ENSMEUG00000000063
Macropus eugenii
ENSMEUG00000000063
I
0.786
CEBPB
Gallus gallus
ENSGALG00000008014
I
0.786
ENSLAFG00000026180
Loxodonta africana
ENSLAFG00000026180
I
0.786
CEBPB
Anolis carolinensis
ENSACAG00000015567
I
0.786
ENSMODG00000016314
Monodelphis domestica
ENSMODG00000016314
I
0.786
CEBPB
Oryctolagus cuniculus
ENSOCUG00000024667
I
0.786
CEBPB
Gorilla gorilla
ENSGGOG00000025010
I
0.786
ENSMPUG00000019019
Mustela putorius furo
ENSMPUG00000019019
I
0.786
ENSOARG00000013395
Ovis aries
ENSOARG00000013395
I
0.786
ENSFALG00000014081
Ficedula albicollis
ENSFALG00000014081
I
0.786
CEBPB
Dasypus novemcinctus
ENSDNOG00000041573
I
0.786
Cebpb
Mus musculus
ENSMUSG00000056501
D
0.786
ENSLACG00000002076
Latimeria chalumnae
ENSLACG00000002076
I
0.785
ENSLOCG00000018358
Lepisosteus oculatus
ENSLOCG00000018358
I
0.785
Pvit_03335
Pogona vitticeps
Pvit_03335
I
0.785