estExt_fgenesh2_pg.C_4050010 (Branchiostoma floridae)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 estExt_fgenesh2_pg.C_4050010 T070852_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Creb5
M02866_2.00
Mus musculus
NATGACGTCAYH

DRTGACGTCATN
SELEX
Jolma et al.(2013)
Creb5_1
0.919 0.797
CREB5
M04299_2.00
Homo sapiens
NVTKACRTMABN

NVTKAYGTMABN
SELEX
Yin et al.(2017)
CREB5_eDBD_HT-SELEX
0.919 0.797
CREB5
M04301_2.00
Homo sapiens
NRTKACGTMAYN

NRTKACGTMAYN
SELEX
Yin et al.(2017)
CREB5_FL_HT-SELEX
0.919 0.797
CREB5
M04300_2.00
Homo sapiens
NRTKACRTCAYN

NRTGAYGTMAYN
SELEX
Yin et al.(2017)
CREB5_eDBD_Methyl-HT-SELEX
0.919 0.797
CREB5
M04302_2.00
Homo sapiens
NATGACRTCAYN

NRTGAYGTCATN
SELEX
Yin et al.(2017)
CREB5_FL_Methyl-HT-SELEX
0.919 0.797
Atf7
M01823_2.00
Mus musculus
HKACGTMAYN

NRTKACGTMD
PBM
Weirauch et al.(2014)
pTH5081
0.916 0.828
Atf2
M01808_2.00
Mus musculus
NRTKAYGYMD

HKRCRTMAYN
PBM
Weirauch et al.(2014)
pTH5083
0.879 0.812
Atf2
M08827_2.00
Mus musculus
VTGACVTCABY

RVTGABGTCAB
Misc
Kulakovskiy et al.(2013)
ATF2_MOUSE.H11MO.0.A
0.879 0.812
Atf2
M09493_2.00
Mus musculus
NNVTGABVTCAB

VTGABVTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf2_GSE56872
0.879 0.812
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_4050010 bZIP 349 412

Links

Other bZIP family TFs
Other Branchiostoma floridae TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAG00000000911 Chlorocebus sabaeus ENSCSAG00000000911 N 0.000
ENSNLEG00000008268 Nomascus leucogenys ENSNLEG00000008268 N 0.000
ENSPANG00000018749 Papio anubis ENSPANG00000018749 N 0.000
ENSPPYG00000001752 Pongo abelii ENSPPYG00000001752 N 0.000
ENSSTOG00000009598 Ictidomys tridecemlineatus ENSSTOG00000009598 N 0.000
ZBTB40 Homo sapiens ENSG00000184677 N 0.000
ZBTB40 Gorilla gorilla ENSGGOG00000010010 N 0.000
ZBTB40 Macaca mulatta ENSMMUG00000018618 N 0.000
ZBTB40 Erinaceus europaeus ENSEEUG00000001708 N 0.000
ZBTB40 Pan troglodytes ENSPTRG00000000315 N 0.000