CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_10402
(
Fragilariopsis cylindrus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
estExt_Genewise1.C_10402
T070927_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_10402
bZIP
155
212
TAQERAQQNRDRNREHARSTRLRKKAYVSKLKELVEGLHAERTEEVRQRRVAIQHLAE
Links
Other
bZIP
family TFs
Other
Fragilariopsis cylindrus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J45142
Phaeodactylum tricornutum
Phatr3_J45142
N
0.890
Thaps24507
Thalassiosira pseudonana
Thaps24507
N
0.834
Thaps20996
Thalassiosira pseudonana
Thaps20996
N
0.821
Phatr3_J42577
Phaeodactylum tricornutum
Phatr3_J42577
N
0.816
estExt_fgenesh2_pg.C_260038
Fragilariopsis cylindrus
estExt_fgenesh2_pg.C_260038
N
0.811
estExt_Genewise1Plus.C_71171
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_71171
N
0.798
Phatr3_J50039
Phaeodactylum tricornutum
Phatr3_J50039
N
0.796
Phatr3_J50038
Phaeodactylum tricornutum
Phatr3_J50038
N
0.787