Sakowv30004199m.g (Saccoglossus kowalevskii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Sakowv30004199m.g T071293_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.785 0.641
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR

YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.785 0.641
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR

YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.785 0.641
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR

YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.785 0.641
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR

YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.785 0.641
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC

GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.785 0.641
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT

ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.785 0.641
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB

VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.785 0.641
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR

YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.785 0.641
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23919557_peptide bZIP 267 330
23919558_peptide bZIP 267 330

Links

Other bZIP family TFs
Other Saccoglossus kowalevskii TFs

Invalid Input OrderBy

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action