CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30045481m.g
(
Saccoglossus kowalevskii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Sakowv30045481m.g
T071330_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kay
M03637_2.00
Drosophila melanogaster
NKATGASTCATMV
BKATGASTCATMN
SELEX
Nitta et al.(2015)
kay_1
0.822
0.524
kay
M03638_2.00
Drosophila melanogaster
GATGACGTCATM
KATGACGTCATC
SELEX
Nitta et al.(2015)
kay_2
0.822
0.524
kay
M06019_2.00
Drosophila melanogaster
DMTGASTCAYS
SRTGASTCAKH
B1H
Zhu et al.(2011)
kay_Jra_SANGER_5_FBgn0001297
0.822
0.524
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23915353_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915354_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915355_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915356_peptide
bZIP
145
207
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915357_peptide
bZIP
120
182
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
Links
Other
bZIP
family TFs
Other
Saccoglossus kowalevskii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy