Cagra.0096s0044 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.0096s0044 T071464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA7
M01774_2.00 		Arabidopsis thaliana
WKACGTCAYN
NRTGACGTMW		 PBM
Weirauch et al.(2014)
pTH7198 		0.806 0.909
TGA7
M06758_2.00 		Arabidopsis thaliana
NYNACGTCABCDNY
RNHGVTGACGTNRN		 Dap-seq
OMalley et al.(2016)
bZIP50_colamp_v31 		0.806 0.909
TGA7
M06759_2.00 		Arabidopsis thaliana
NDNNDRTGACGTCAKCN
NGMTGACGTCAYHNNHN		 Dap-seq
OMalley et al.(2016)
bZIP50_col_v31 		0.806 0.909
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0096s0044.1.p bZIP 91 145
Cagra.0096s0044.2.p bZIP 91 145

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action