Cagra.0483s0006 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.0483s0006 T071467_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV

BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.889 0.952
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV

BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.889 0.952
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0483s0006.1.p bZIP 22 84

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI32574 Acyrthosiphon pisum ACYPI32574 N 0.000
ACYPI40660 Acyrthosiphon pisum ACYPI40660 N 0.000
ACYPI45243 Acyrthosiphon pisum ACYPI45243 N 0.000