CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.24541s0001
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.24541s0001
T071507_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.24541s0001.1.p
bZIP
77
140
DKDDRRKKRKLSNRKSAQRSRIKKQKHLEDVRSKLNQLKFENRELKNRLRYVLYHCERAKMESD
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10027849m.g
Capsella rubella
Carubv10027849m.g
N
0.888
Bostr.0568s0198
Boechera stricta
Bostr.0568s0198
N
0.868
scaffold_803330.1
Arabidopsis lyrata
scaffold_803330.1
N
0.857
scaffold_33400002.1
Arabidopsis lyrata
scaffold_33400002.1
N
0.857
Thhalv10010997m.g
Eutrema salsugineum
Thhalv10010997m.g
N
0.829
Bo3g097630
Brassica oleracea
Bo3g097630
N
0.817
AtbZIP5
Arabidopsis thaliana
AT3G49760
N
0.810
AtbZIP5
Arabidopsis lyrata
scaffold_501993.1
N
0.808
Bostr.6864s0265
Boechera stricta
Bostr.6864s0265
N
0.805
Bra036025
Brassica rapa
Bra036025
N
0.803
Bo8g079020
Brassica oleracea
Bo8g079020
N
0.803
Bra024424
Brassica rapa
Bra024424
N
0.800