CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2961s0025
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.2961s0025
T071512_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G21230
M01775_2.00
Arabidopsis thaliana
YGMCAGYTRK
MYARCTGKCR
PBM
Weirauch et al.(2014)
pTH7230
0.850
0.952
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2961s0025.1.p
bZIP
347
409
SDPKRVKRIFANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTSQNS
Cagra.2961s0025.2.p
bZIP
347
409
SDPKRVKRIFANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTSQNS
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10023063m.g
Capsella rubella
Carubv10023063m.g
I
0.889
Thhalv10000129m.g
Eutrema salsugineum
Thhalv10000129m.g
I
0.850
Bostr.5022s0114
Boechera stricta
Bostr.5022s0114
I
0.850
AT2G21230
Arabidopsis thaliana
AT2G21230
D
0.850
fgenesh2_kg.4__38__AT2G21230.1
Arabidopsis lyrata
fgenesh2_kg.4__38__AT2G21230.1
I
0.850
Bo4g145800
Brassica oleracea
Bo4g145800
I
0.831
Bra030314
Brassica rapa
Bra030314
I
0.831
30170.m014146
Ricinus communis
30170.m014146
I
0.822
GSMUA_Achr11G03050_001
Musa acuminata
GSMUA_Achr11G03050_001
I
0.809
Bo4g052150
Brassica oleracea
Bo4g052150
I
0.807
POSF21
Arabidopsis thaliana
AT2G31370
I
0.807
Thhalv10016790m.g
Eutrema salsugineum
Thhalv10016790m.g
I
0.807
PDK_20s1584971g001
Phoenix dactylifera
PDK_20s1584971g001
I
0.807
Cagra.6952s0017
Capsella grandiflora
Cagra.6952s0017
I
0.807
fgenesh2_kg.4__1126__AT2G31370.4
Arabidopsis lyrata
fgenesh2_kg.4__1126__AT2G31370.4
I
0.807
Bostr.24513s0082
Boechera stricta
Bostr.24513s0082
I
0.807
mgf013572m
Mimulus guttatus
mgf013572m
I
0.793
mgf012126m
Mimulus guttatus
mgf012126m
I
0.791
MTR_6g034945
Medicago truncatula
MTR_6g034945
I
0.782