Cagra.2961s0025 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.2961s0025 T071512_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G21230
M01775_2.00
Arabidopsis thaliana
YGMCAGYTRK

MYARCTGKCR
PBM
Weirauch et al.(2014)
pTH7230
0.850 0.952
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2961s0025.1.p bZIP 347 409
Cagra.2961s0025.2.p bZIP 347 409

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10023063m.g Capsella rubella Carubv10023063m.g I 0.889
Thhalv10000129m.g Eutrema salsugineum Thhalv10000129m.g I 0.850
Bostr.5022s0114 Boechera stricta Bostr.5022s0114 I 0.850
AT2G21230 Arabidopsis thaliana AT2G21230 D 0.850
fgenesh2_kg.4__38__AT2G21230.1 Arabidopsis lyrata fgenesh2_kg.4__38__AT2G21230.1 I 0.850
Bo4g145800 Brassica oleracea Bo4g145800 I 0.831
Bra030314 Brassica rapa Bra030314 I 0.831
30170.m014146 Ricinus communis 30170.m014146 I 0.822
GSMUA_Achr11G03050_001 Musa acuminata GSMUA_Achr11G03050_001 I 0.809
Bo4g052150 Brassica oleracea Bo4g052150 I 0.807
POSF21 Arabidopsis thaliana AT2G31370 I 0.807
Thhalv10016790m.g Eutrema salsugineum Thhalv10016790m.g I 0.807
PDK_20s1584971g001 Phoenix dactylifera PDK_20s1584971g001 I 0.807
Cagra.6952s0017 Capsella grandiflora Cagra.6952s0017 I 0.807
fgenesh2_kg.4__1126__AT2G31370.4 Arabidopsis lyrata fgenesh2_kg.4__1126__AT2G31370.4 I 0.807
Bostr.24513s0082 Boechera stricta Bostr.24513s0082 I 0.807
mgf013572m Mimulus guttatus mgf013572m I 0.793
mgf012126m Mimulus guttatus mgf012126m I 0.791
MTR_6g034945 Medicago truncatula MTR_6g034945 I 0.782