Cagra.5456s0001 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.5456s0001 T071528_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP63
M01787_2.00
Arabidopsis thaliana
NNNWSACGTGKN

NMCACGTSWNNN
PBM
Weirauch et al.(2014)
pTH7300
0.827 0.983
estExt_Genewise1.C_2060077
M01832_2.00
Physcomitrella patens
NNHSACGTGKNN

NNMCACGTSDNN
PBM
Weirauch et al.(2014)
pTH8666
0.794 0.724
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN

NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.793 0.793
CPRF2_PETCR
M10069_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_01
0.789 0.776
CPRF2_PETCR
M10070_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_Q2
0.789 0.776
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5456s0001.1.p bZIP 162 219
Cagra.5456s0001.2.p bZIP 155 212

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29598.m000468 Ricinus communis 29598.m000468 I 0.794
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.793
BZIP63 Arabidopsis thaliana AT5G28770 D 0.827
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.805
Bo2g151850 Brassica oleracea Bo2g151850 I 0.808
Bo7g093030 Brassica oleracea Bo7g093030 I 0.793
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.825
Bra010010 Brassica rapa Bra010010 I 0.808
Bra020620 Brassica rapa Bra020620 I 0.808
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.827
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.792
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.795
Ca_01234 Cicer arietinum Ca_01234 I 0.794
Ca_03753 Cicer arietinum Ca_03753 I 0.793
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.785
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.789
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.796
Cla011478 Citrullus lanatus Cla011478 I 0.790
Cla020112 Citrullus lanatus Cla020112 I 0.790
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.789
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.790
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.791
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.794
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.791
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.827
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.797
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.797
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.793
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.797
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.793
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.793
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.797
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.797
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.805
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.792
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.784
MDP0000270365 Malus domestica MDP0000270365 I 0.783
mgf009803m Mimulus guttatus mgf009803m I 0.794
mgf012838m Mimulus guttatus mgf012838m I 0.784
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.793
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.797
OB12G24740 Oryza brachyantha OB12G24740 I 0.793
OBART12G18120 Oryza barthii OBART12G18120 I 0.805
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.805
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.805
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.805
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.797
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.796
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.805
OS12G0601800 Oryza sativa OS12G0601800 I 0.805
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.797
PK05128.1 Cannabis sativa PK05128.1 D 0.793
Pm003522 Prunus mume Pm003522 I 0.784
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.794
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.797
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.794
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.797
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.794
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.797
TCM_026349 Theobroma cacao TCM_026349 I 0.794
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.827
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.788
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.797