Carubv10001450m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10001450m.g T071542_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP63
M01787_2.00
Arabidopsis thaliana
NNNWSACGTGKN

NMCACGTSWNNN
PBM
Weirauch et al.(2014)
pTH7300
0.827 0.983
estExt_Genewise1.C_2060077
M01832_2.00
Physcomitrella patens
NNHSACGTGKNN

NNMCACGTSDNN
PBM
Weirauch et al.(2014)
pTH8666
0.794 0.727
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN

NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.793 0.800
CPRF2_PETCR
M10069_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_01
0.789 0.764
CPRF2_PETCR
M10070_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_Q2
0.789 0.776
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001450m bZIP 163 217
Carubv10001464m bZIP 165 220
Carubv10001474m bZIP 156 213

Links

Other bZIP family TFs
Other Capsella rubella TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.827
BZIP63 Arabidopsis thaliana AT5G28770 D 0.827
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.827
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.827
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.825
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.813
Bra020620 Brassica rapa Bra020620 I 0.808
Bra010010 Brassica rapa Bra010010 I 0.808
Bo2g151850 Brassica oleracea Bo2g151850 I 0.808
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.805
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.805
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.805
OBART12G18120 Oryza barthii OBART12G18120 I 0.805
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.805
OS12G0601800 Oryza sativa OS12G0601800 I 0.805
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.805
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.805
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.797
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.797
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.797
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.797
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.797
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.797
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.797
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.797
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.797
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.797
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.797
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.796
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.796
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.795
29598.m000468 Ricinus communis 29598.m000468 I 0.794
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.794
mgf009803m Mimulus guttatus mgf009803m I 0.794
TCM_026349 Theobroma cacao TCM_026349 I 0.794
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.794
Ca_01234 Cicer arietinum Ca_01234 I 0.794
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.794
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.794
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.793
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.793
PK05128.1 Cannabis sativa PK05128.1 D 0.793
Ca_03753 Cicer arietinum Ca_03753 I 0.793
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.793
OB12G24740 Oryza brachyantha OB12G24740 I 0.793
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.793
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.793
Bo7g093030 Brassica oleracea Bo7g093030 I 0.793
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.792
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.792
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.791
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.791
Cla011478 Citrullus lanatus Cla011478 I 0.790
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.790
Cla020112 Citrullus lanatus Cla020112 I 0.790
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.789
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.789
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.788
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.785
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.784
Pm003522 Prunus mume Pm003522 I 0.784
mgf012838m Mimulus guttatus mgf012838m I 0.784
MDP0000270365 Malus domestica MDP0000270365 I 0.783