Carubv10002068m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10002068m.g T071545_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.871 0.823
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.871 0.823
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10002068m bZIP 72 133

Links

Other bZIP family TFs
Other Capsella rubella TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.881
Bra023540 Brassica rapa Bra023540 I 0.881
Bo9g163740 Brassica oleracea Bo9g163740 I 0.878
Bra008670 Brassica rapa Bra008670 I 0.878
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.876
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.876
Bo2g012800 Brassica oleracea Bo2g012800 I 0.876
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.876
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.871
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.871
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.871
Bo3g010620 Brassica oleracea Bo3g010620 I 0.871
Bo3g010750 Brassica oleracea Bo3g010750 I 0.861
Bra006324 Brassica rapa Bra006324 I 0.861
Pm015434 Prunus mume Pm015434 I 0.857
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.857
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.857
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.857
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.855
Cla016748 Citrullus lanatus Cla016748 I 0.855
mgf017392m Mimulus guttatus mgf017392m I 0.852
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.849
MDP0000863909 Malus domestica MDP0000863909 I 0.848
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.841
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.841
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.836
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.836
Cla020641 Citrullus lanatus Cla020641 I 0.834
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.834
Ca_09362 Cicer arietinum Ca_09362 I 0.829
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.828
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.828
30138.m003866 Ricinus communis 30138.m003866 I 0.827
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.827
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.827
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.827
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.827
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.827
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.827
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.827
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.827
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.827
Cla005975 Citrullus lanatus Cla005975 I 0.827
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.827
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.826
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.825
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.825
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.823
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.823
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.823
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.823
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.823
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.823
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.821
MDP0000891108 Malus domestica MDP0000891108 I 0.820
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.820
MDP0000183562 Malus domestica MDP0000183562 I 0.820
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.819
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.818
30131.m007078 Ricinus communis 30131.m007078 I 0.817
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.817
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.817
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.817
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.817
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.817
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.817
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.816
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.815
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.814
MDP0000239026 Malus domestica MDP0000239026 I 0.813
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.813
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.813
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.812
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.809
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.809
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.808
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.808
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.808
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.807
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.807
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.807
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.807
TCM_000835 Theobroma cacao TCM_000835 I 0.806
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.806
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.806
Pm002353 Prunus mume Pm002353 I 0.806
PK07533.1 Cannabis sativa PK07533.1 I 0.804
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.804
Ca_17416 Cicer arietinum Ca_17416 I 0.804
Cla016841 Citrullus lanatus Cla016841 I 0.804
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.803
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.802
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.802
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.798
mgf003466m Mimulus guttatus mgf003466m I 0.797
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.797
MDP0000205823 Malus domestica MDP0000205823 I 0.795
Si019897m.g Setaria italica Si019897m.g I 0.795
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.794
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.794
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.794
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.794
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.793
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.793
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.793
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.793
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.792
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.792
mgf021986m Mimulus guttatus mgf021986m I 0.791
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.790
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.790
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.789
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.789
PDK_20s1520551g003 Phoenix dactylifera PDK_20s1520551g003 I 0.789
MDP0000738631 Malus domestica MDP0000738631 I 0.788
Si031238m.g Setaria italica Si031238m.g I 0.788
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.788
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.787
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.787
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.787
OBART08G18720 Oryza barthii OBART08G18720 I 0.786
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.786
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.786
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.786
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.786
OS08G0487100 Oryza sativa OS08G0487100 I 0.786
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.786
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.786
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.786
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.786
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.786
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.786
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.785
mgf018581m Mimulus guttatus mgf018581m I 0.784
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.784
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.784
MDP0000891899 Malus domestica MDP0000891899 I 0.784
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.784
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.783
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.783
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.783
mgf007535m Mimulus guttatus mgf007535m I 0.782
mgf013074m Mimulus guttatus mgf013074m I 0.782