Carubv10006580m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10006580m.g T071556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN

NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.784 0.684
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006580m bZIP 209 271

Links

Other bZIP family TFs
Other Capsella rubella TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BZIP27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3003160 I 0.833
Thhalv10023128m.g Eutrema salsugineum Thhalv10023128m.g N 0.829
FD Arabidopsis lyrata Al_scaffold_0007_453 I 0.803
FD Arabidopsis thaliana AT4G35900 I 0.803
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.802
MDP0000169473 Malus domestica MDP0000169473 N 0.800
Cla009066 Citrullus lanatus Cla009066 I 0.785
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I 0.785
PK24978.1 Cannabis sativa PK24978.1 D 0.784
TCM_000152 Theobroma cacao TCM_000152 I 0.784
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I 0.784