Carubv10009673m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10009673m.g T071562_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH

DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.846 1.000
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN

NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.846 1.000
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN

NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.832 0.919
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN

NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.832 0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN

NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.817 0.871
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD

HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.817 0.871
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN

NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.817 0.871
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009670m bZIP 147 208
Carubv10009673m bZIP 147 208

Links

Other bZIP family TFs
Other Capsella rubella TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSP00000335578-D1 Bos grunniens ENSP00000335578-D1 I 0.000
ARGFX Bos taurus ENSBTAG00000002273 I 0.000
ARGFX Callithrix jacchus ENSCJAG00000008507 I 0.000
ENSCPOG00000006393 Cavia porcellus ENSCPOG00000006393 I 0.000
CGOC_0000645001 Cylicostephanus goldi CGOC_0000645001 I 0.000
ARGFX Dasypus novemcinctus ENSDNOG00000031231 I 0.000
EEL_0000436201 Elaeophora elaphi EEL_0000436201 I 0.000
ARGFX Equus caballus ENSECAG00000013996 I 0.000
ARGFX Gorilla gorilla ENSGGOG00000005362 I 0.000
ARGFX Homo sapiens ENSG00000186103 D 0.000
ENSMMUP00000021529 Macaca fascicularis ENSMMUP00000021529 I 0.000
ARGFX Macaca mulatta ENSMMUG00000016395 I 0.000
MhA1_Contig726.frz3.gene2 Meloidogyne hapla MhA1_Contig726.frz3.gene2 I 0.000
ENSNLEG00000013255 Nomascus leucogenys ENSNLEG00000013255 I 0.000
ENSOPRG00000012148 Ochotona princeps ENSOPRG00000012148 I 0.000
ARGFX Oryctolagus cuniculus ENSOCUG00000008795 I 0.000
ARGFX Otolemur garnettii ENSOGAG00000002406 I 0.000
ENSOARG00000020026 Ovis aries ENSOARG00000020026 I 0.000
ENSPANG00000009686 Papio anubis ENSPANG00000009686 I 0.000
ENSPPYG00000008158 Pongo abelii ENSPPYG00000008158 I 0.000
ENSPPYG00000013497 Pongo abelii ENSPPYG00000013497 I 0.000
PXEA_0000230101 Protopolystoma xenopodis PXEA_0000230101 I 0.000
Smp_171380 Schistosoma mansoni Smp_171380 I 0.000
SMTD_0002261301 Schistosoma mattheei SMTD_0002261301 I 0.000
SROB_0002221601 Schistosoma rodhaini SROB_0002221601 I 0.000
ENSSSCG00000011886 Sus scrofa ENSSSCG00000011886 I 0.000
TELCIR_21719 Teladorsagia circumcincta TELCIR_21719 I 0.000
TRE_0001559401 Trichobilharzia regenti TRE_0001559401 I 0.000
ARGFX Tupaia belangeri ENSTBEG00000015401 I 0.000
ARGFX Tursiops truncatus ENSTTRG00000001349 I 0.000