Carubv10009673m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10009673m.g T071562_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH

DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.846 1.000
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN

NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.846 1.000
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN

NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.832 0.919
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN

NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.832 0.903
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN

NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.817 0.871
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD

HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.817 0.871
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN

NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.817 0.871
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009670m bZIP 147 208
Carubv10009673m bZIP 147 208

Links

Other bZIP family TFs
Other Capsella rubella TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI007601 Acyrthosiphon pisum ACYPI007601 I 0.000
AAEL007190 Aedes aegypti AAEL007190 I 0.000
Alligator_sinensis_CCG020979.1 Alligator sinensis Alligator_sinensis_CCG020979.1 I 0.000
NR2E3 Anolis carolinensis ENSACAG00000011910 I 0.000
AALB001133 Anopheles albimanus AALB001133 I 0.000
AARA003887 Anopheles arabiensis AARA003887 I 0.000
AATE003142 Anopheles atroparvus AATE003142 I 0.000
ACHR009938 Anopheles christyi ACHR009938 N 0.000
ACOM026748 Anopheles coluzzii ACOM026748 I 0.000
ADAC006988 Anopheles darlingi ADAC006988 I 0.000
ADIR004737 Anopheles dirus ADIR004737 I 0.000
AEPI011067 Anopheles epiroticus AEPI011067 I 0.000
AFAF011447 Anopheles farauti AFAF011447 I 0.000
AMEM000983 Anopheles merus AMEM000983 I 0.000
AMIN006845 Anopheles minimus AMIN006845 I 0.000
AQUA005692 Anopheles quadriannulatus AQUA005692 I 0.000
ASTEI11696 Anopheles stephensi ASTEI11696 I 0.000
ASTEI11644 Anopheles stephensi ASTEI11644 I 0.000
GB49738 Apis mellifera GB49738 I 0.000
Afo_R007066 Aptenodytes forsteri Afo_R007066 I 0.000
ENSAMXG00000017872 Astyanax mexicanus ENSAMXG00000017872 I 0.000
BGLB004019 Biomphalaria glabrata BGLB004019 I 0.000
e_gw.107.44.1 Branchiostoma floridae e_gw.107.44.1 I 0.000
e_gw.324.28.1 Branchiostoma floridae e_gw.324.28.1 I 0.000
Aan_R004022 Calypte anna Aan_R004022 I 0.000
CapteG171557 Capitella teleta CapteG171557 I 0.000
Cmyd_10012017 Chelonia mydas Cmyd_10012017 I 0.000
CLEC025263 Cimex lectularius CLEC025263 I 0.000
CGI_10007932 Crassostrea gigas CGI_10007932 I 0.000
CpipJ_CPIJ017334 Culex pipiens CpipJ_CPIJ017334 I 0.000
CPIJ017334 Culex quinquefasciatus CPIJ017334 I 0.000
KGM_05606 Danaus plexippus KGM_05606 I 0.000
nr2e3 Danio rerio ENSDARG00000045904 I 0.000
GF13031 Drosophila ananassae FBgn0090064 I 0.000
GH20426 Drosophila grimshawi FBgn0127889 I 0.000
Hr51 Drosophila melanogaster FBgn0034012 D 0.000
GI19610 Drosophila mojavensis FBgn0142347 I 0.000
GL17752 Drosophila persimilis FBgn0155355 I 0.000
GA30480 Drosophila pseudoobscura FBgn0264774 D 0.000
GD11109 Drosophila simulans FBgn0182865 I 0.000
GJ14974 Drosophila virilis FBgn0202177 I 0.000
GK20892 Drosophila willistoni FBgn0222886 I 0.000
GE13645 Drosophila yakuba FBgn0231304 I 0.000
ENSFALG00000009699 Ficedula albicollis ENSFALG00000009699 I 0.000
ENSGMOG00000019194 Gadus morhua ENSGMOG00000019194 I 0.000
NR2E3 Gallus gallus ENSGALG00000002093 I 0.000
NR2E3 Gasterosteus aculeatus ENSGACG00000017060 I 0.000
Gfo_R008863 Geospiza fortis Gfo_R008863 I 0.000
Hsal_07902--XP_396999.3_APIME Harpegnathos saltator Hsal_07902--XP_396999.3_APIME I 0.000
HelroG139475 Helobdella robusta HelroG139475 I 0.000
ENSLACG00000022378 Latimeria chalumnae ENSLACG00000022378 I 0.000
ENSLOCG00000014973 Lepisosteus oculatus ENSLOCG00000014973 I 0.000
LDEC022044 Leptinotarsa decemlineata LDEC022044 I 0.000
LotgiG137595 Lottia gigantea LotgiG137595 I 0.000
LCUP008516 Lucilia cuprina LCUP008516 I 0.000
LLOJ002531 Lutzomyia longipalpis LLOJ002531 I 0.000
NR2E3 Meleagris gallopavo ENSMGAG00000001449 I 0.000
MDOA010244 Musca domestica MDOA010244 I 0.000
NV14480 Nasonia vitripennis NV14480 I 0.000
Ogr12843 Ophisaurus gracilis Ogr12843 I 0.000
ENSONIG00000007109 Oreochromis niloticus ENSONIG00000007109 I 0.000
NR2E3 Oryzias latipes ENSORLG00000000011 I 0.000
PHUM039420 Pediculus humanus PHUM039420 I 0.000
ENSPFOG00000006106 Poecilia formosa ENSPFOG00000006106 I 0.000
Pvit_13689 Pogona vitticeps Pvit_13689 I 0.000
RPRC002557 Rhodnius prolixus RPRC002557 I 0.000
ENSTGUG00000004498 Taeniopygia guttata ENSTGUG00000004498 I 0.000
NR2E3 Takifugu rubripes ENSTRUG00000015582 I 0.000
TC009378 Tribolium castaneum TC009378 I 0.000
ENSXMAG00000010311 Xiphophorus maculatus ENSXMAG00000010311 I 0.000