Carubv10013729m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10013729m.g T071569_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.819 0.806
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.819 0.806
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.819 0.806
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.809 0.710
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.808 0.710
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.822 0.758
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.808 0.710
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.822 0.758
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.802 0.629
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.822 0.758
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.822 0.758
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.784 0.645
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.784 0.645
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.822 0.758
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.822 0.758
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10013729m bZIP 357 420
Carubv10013736m bZIP 357 419

Links

Other bZIP family TFs
Other Capsella rubella TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PMAA_070340 Penicillium marneffei PMAA_070340 I 0.000
PDE_04102 Penicillium oxalicum PDE_04102 I 0.000
PABG_04642 Paracoccidioides brasiliensis PABG_04642 I 0.000
PAAG_08490 Paracoccidioides sp lutzii PAAG_08490 I 0.000
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I 0.000
NechaG40581 Fusarium solani NechaG40581 I 0.000
MGYG_00861 Microsporum gypseum MGYG_00861 I 0.000
MCYG_00297 Arthroderma otae MCYG_00297 I 0.000
MBM_05016 Marssonina brunnea MBM_05016 I 0.000
HMPREF1624_07464 Sporothrix schenckii HMPREF1624_07464 I 0.000
HCBG_04625 Histoplasma capsulatum HCBG_04625 I 0.000
H101_07435 Trichophyton interdigitale H101_07435 I 0.000
H072_8333 Dactylellina haptotyla H072_8333 I 0.000
GSTUM_00005598001 Tuber melanosporum GSTUM_00005598001 I 0.000
GLRG_07449 Colletotrichum graminicola GLRG_07449 I 0.000
FVEG_02723 Fusarium verticillioides FVEG_02723 I 0.000
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I 0.000
PDIP_85460 Penicillium digitatum PDIP_85460 I 0.000
PEX1_083360 Penicillium expansum PEX1_083360 I 0.000
estExt_fgenesh1_pg.C_70327 Cryphonectria parasitica estExt_fgenesh1_pg.C_70327 I 0.000
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I 0.000
VHEMI03393 Torrubiella hemipterigena VHEMI03393 I 0.000
U727_0043004001 Penicillium solitum U727_0043004001 I 0.000
TSTA_090670 Talaromyces stipitatus TSTA_090670 I 0.000
TESG_02247 Trichophyton tonsurans TESG_02247 I 0.000
TEQG_02692 Trichophyton equinum TEQG_02692 I 0.000
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I 0.000
SPBR_06325 Sporothrix brasiliensis SPBR_06325 I 0.000
SBOR_3621 Sclerotinia borealis SBOR_3621 I 0.000
SAPIO_CDS8637 Scedosporium apiospermum SAPIO_CDS8637 I 0.000
PVAR5_8925 Byssochlamys spectabilis PVAR5_8925 I 0.000
PV07_06437 Cladophialophora immunda PV07_06437 I 0.000
PMAA_070340 Talaromyces marneffei PMAA_070340 I 0.000
PITC_041810 Penicillium italicum PITC_041810 I 0.000
PFICI_07122 Pestalotiopsis fici PFICI_07122 I 0.000
FOXG_14277 Fusarium oxysporum FOXG_14277 I 0.000
FOXG_05408 Fusarium oxysporum FOXG_05408 I 0.000
MCYG_00297 Microsporum canis MCYG_00297 I 0.000
CFIO01_02322 Colletotrichum fioriniae CFIO01_02322 I 0.000
NFIA_083690 Neosartorya fischeri CADNFIAG00006940 I 0.000
NFIA_024310 Neosartorya fischeri CADNFIAG00002261 I 0.000
CADAORAG00005589 Aspergillus oryzae CADAORAG00005589 I 0.000
ANIA_05849 Aspergillus nidulans CADANIAG00007192 I 0.000
AFUA_2G08040 Aspergillus fumigatus CADAFUAG00004446 I 0.000
ACLA_079920 Aspergillus clavatus CADACLAG00007683 I 0.000
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I 0.000
BDDG_04796 Blastomyces dermatitidis BDDG_04796 I 0.000
Bcin09g02560 Botrytis cinerea Bcin09g02560 I 0.000
BBA_08191 Beauveria bassiana BBA_08191 I 0.000
AUEXF2481DRAFT_25614 Aureobasidium subglaciale AUEXF2481DRAFT_25614 I 0.000
CCM_00913 Cordyceps militaris CCM_00913 I 0.000
A1O9_13001 Exophiala aquamarina A1O9_13001 I 0.000
A1O9_03542 Exophiala aquamarina A1O9_03542 I 0.000
CGGC5_10205 Colletotrichum gloeosporioides CGGC5_10205 I 0.000
CH063_07213 Colletotrichum higginsianum CH063_07213 I 0.000
FGRRES_17309 Fusarium graminearum FGRRES_17309 I 0.000
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I 0.000
F503_05733 Ophiostoma piceae uamh F503_05733 I 0.000
EV44_g6283 Erysiphe necator EV44_g6283 I 0.000
EURHEDRAFT_513914 Aspergillus ruber EURHEDRAFT_513914 I 0.000
A1O3_03291 Capronia epimyces A1O3_03291 I 0.000
DRE_04286 Drechslerella stenobrocha DRE_04286 I 0.000
CTHT_0050850 Chaetomium thermophilum CTHT_0050850 I 0.000
Cob_02185 Colletotrichum orbiculare Cob_02185 I 0.000
CMQ_2744 Grosmannia clavigera CMQ_2744 I 0.000
CSUB01_08337 Colletotrichum sublineola CSUB01_08337 I 0.000
A1O7_03671 Cladophialophora yegresii A1O7_03671 N 0.000
A1O5_00025 Cladophialophora psammophila A1O5_00025 N 0.000
UREG_00865 Uncinocarpus reesii UREG_00865 N 0.000
EPUS_07292 Endocarpon pusillum EPUS_07292 N 0.000
Z517_10110 Fonsecaea pedrosoi Z517_10110 N 0.000
Z518_01742 Rhinocladiella mackenziei Z518_01742 N 0.000
Z519_00024 Cladophialophora bantiana Z519_00024 N 0.000
A1O1_08282 Capronia coronata A1O1_08282 N 0.000
CIMG_00917 Coccidioides immitis CIMG_00917 N 0.000
PV04_03866 Capronia semiimmersa PV04_03866 N 0.000
PV05_05583 Exophiala xenobiotica PV05_05583 N 0.000
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N 0.000
PV08_04106 Exophiala spinifera PV08_04106 N 0.000
PV10_05308 Exophiala mesophila PV10_05308 N 0.000
PV11_00815 Exophiala sideris PV11_00815 N 0.000
HMPREF1541_04418 Cyphellophora europaea HMPREF1541_04418 N 0.000
M438DRAFT_351239 Aureobasidium pullulans M438DRAFT_351239 N 0.000
CPC735_054240 Coccidioides posadasii CPC735_054240 N 0.000
G647_04707 Cladophialophora carrionii G647_04707 N 0.000
AOL_s00083g362 Arthrobotrys oligospora AOL_s00083g362 N 0.000