Carubv10015943m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10015943m.g T071573_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.775 1.000
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.775 1.000
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.775 1.000
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.775 1.000
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.775 1.000
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.775 1.000
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.775 1.000
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.775 1.000
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.775 1.000
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.775 1.000
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.775 1.000
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.775 1.000
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015943m bZIP 1 46

Links

Other bZIP family TFs
Other Capsella rubella TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.775
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.775
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.775
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.775
Si002195m.g Setaria italica Si002195m.g I 0.775
TGA2.3 Oryza sativa OS01G0279900 I 0.775
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.775
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.775
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.775
Thhalv10015975m.g Eutrema salsugineum Thhalv10015975m.g N 0.775
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.775
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.775
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.775
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.775
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.775
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.775
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.775
Bo5g133550 Brassica oleracea Bo5g133550 I 0.775
Bra034767 Brassica rapa Bra034767 I 0.775
Bo1g139470 Brassica oleracea Bo1g139470 I 0.775
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.775
TGA2 Arabidopsis thaliana AT5G06950 D 0.775
TGA5 Arabidopsis thaliana AT5G06960 D 0.775
Bra038705 Brassica rapa Bra038705 I 0.775
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.775
OBART01G11380 Oryza barthii OBART01G11380 I 0.775
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.775
OB01G21470 Oryza brachyantha OB01G21470 I 0.775
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.775
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.775
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.775
TGA6 Arabidopsis thaliana AT3G12250 D 0.775