Carubv10016005m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10016005m.g T071575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP28
M06772_2.00 		Arabidopsis thaliana
DNNDRWSACGTGKCD
HGMCACGTSWYHNNH		 Dap-seq
OMalley et al.(2016)
bZIP28_col_a 		0.880 0.938
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10016005m bZIP 190 253

Links

Other bZIP family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.8632s0019 Capsella grandiflora Cagra.8632s0019 I 0.890
BZIP28 Arabidopsis lyrata fgenesh2_kg.3__1116__AT3G10800.1 I 0.880
BZIP28 Arabidopsis thaliana AT3G10800 D 0.880
Bostr.19424s1002 Boechera stricta Bostr.19424s1002 I 0.867