Ciclev10013334m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10013334m.g T071633_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.814 0.860
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.814 0.860
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10013334m bZIP 82 138

Links

Other bZIP family TFs
Other Citrus clementina TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.833
Cla016748 Citrullus lanatus Cla016748 I 0.829
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.829
Pm015434 Prunus mume Pm015434 I 0.828
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.828
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.828
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.828
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.828
mgf017392m Mimulus guttatus mgf017392m I 0.828
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.822
MDP0000863909 Malus domestica MDP0000863909 I 0.819
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.818
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.817
30131.m007078 Ricinus communis 30131.m007078 I 0.817
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.814
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.813
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.809
Bra008670 Brassica rapa Bra008670 I 0.808
Bo9g163740 Brassica oleracea Bo9g163740 I 0.808
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.807
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.807
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.807
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.807
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.807
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.807
Bo2g012800 Brassica oleracea Bo2g012800 I 0.807
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.807
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.807
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.807
Bra023540 Brassica rapa Bra023540 I 0.807
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.807
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.807
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.807
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.807
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.805
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.804
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.803
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.803
Cla020641 Citrullus lanatus Cla020641 I 0.803
Pm002353 Prunus mume Pm002353 I 0.802
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.802
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.802
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.801
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.801
TCM_000835 Theobroma cacao TCM_000835 I 0.801
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.801
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.801
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.800
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.800
Bo3g010620 Brassica oleracea Bo3g010620 I 0.798
MDP0000891899 Malus domestica MDP0000891899 I 0.798
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.798
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.798
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.798
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.798
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.798
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.798
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.798
30138.m003866 Ricinus communis 30138.m003866 I 0.798
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.798
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.798
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.798
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.798
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.798
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.798
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.798
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.797
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.796
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.796
Cla016841 Citrullus lanatus Cla016841 I 0.795
MDP0000891108 Malus domestica MDP0000891108 I 0.795
MDP0000183562 Malus domestica MDP0000183562 I 0.795
Cla005975 Citrullus lanatus Cla005975 I 0.795
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.794
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.794
MDP0000261154 Malus domestica MDP0000261154 N 0.794
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.794
28976.m000155 Ricinus communis 28976.m000155 N 0.794
PK07533.1 Cannabis sativa PK07533.1 I 0.794
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.793
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.793
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.792
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.792
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.791
MDP0000239026 Malus domestica MDP0000239026 I 0.790
Ca_09362 Cicer arietinum Ca_09362 I 0.788
mgf003466m Mimulus guttatus mgf003466m I 0.788
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.787
Ca_15971 Cicer arietinum Ca_15971 N 0.787
PK01815.1 Cannabis sativa PK01815.1 N 0.787
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.787
Bra006324 Brassica rapa Bra006324 I 0.787
Bo3g010750 Brassica oleracea Bo3g010750 I 0.787
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.786
MDP0000205823 Malus domestica MDP0000205823 I 0.786
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.786
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.786
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.785
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.785
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.785
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.785
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.785
MDP0000738631 Malus domestica MDP0000738631 I 0.784
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.784
mgf018581m Mimulus guttatus mgf018581m I 0.784
VIT_00s0541g00020 Vitis vinifera VIT_00s0541g00020 N 0.784
mgf021986m Mimulus guttatus mgf021986m I 0.783
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.783
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.782
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.782