CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10022730m.g
(
Citrus clementina
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Ciclev10022730m.g
T071643_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.792
0.629
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.792
0.629
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10022730m
bZIP
22
83
DERKRKRMISNRESARRSRMKKQKQMEDLVNEINHLESANAMLKQNIDSSVQRYVEMESANN
Links
Other
bZIP
family TFs
Other
Citrus clementina
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy