Ciclev10027584m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10027584m.g T071648_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.809 0.532
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.809 0.532
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.786 0.565
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.786 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10027584m bZIP 76 137

Links

Other bZIP family TFs
Other Citrus clementina TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.899
TCM_000835 Theobroma cacao TCM_000835 I 0.896
Pm002353 Prunus mume Pm002353 I 0.891
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.891
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.882
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.880
MDP0000738631 Malus domestica MDP0000738631 I 0.876
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.870
Gorai.008G085200 Gossypium raimondii Gorai.008G085200 I 0.867
Ca_09362 Cicer arietinum Ca_09362 I 0.866
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.862
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.862
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.861
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.861
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.860
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.860
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.860
evm.TU.supercontig_129.74 Carica papaya evm.TU.supercontig_129.74 I 0.858
30131.m007078 Ricinus communis 30131.m007078 I 0.855
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.855
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.855
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.848
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.846
MTR_4g097440 Medicago truncatula MTR_4g097440 I 0.844
SapurV1A.0608s0130 Salix purpurea SapurV1A.0608s0130 N 0.840
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.837
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.837
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.835
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.834
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.833
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.833
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.833
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.833
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.833
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.833
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.832
mgf003466m Mimulus guttatus mgf003466m I 0.830
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.829
Cla020641 Citrullus lanatus Cla020641 I 0.829
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.827
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.827
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.826
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.826
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.826
mgf018661m Mimulus guttatus mgf018661m N 0.826
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.825
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.825
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.825
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.825
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.825
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.825
Cucsa.103380 Cucumis sativus Cucsa.103380 N 0.825
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.825
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.825
30138.m003866 Ricinus communis 30138.m003866 I 0.825
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.825
Cla014262 Citrullus lanatus Cla014262 N 0.825
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.825
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.825
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I 0.824
Cla005975 Citrullus lanatus Cla005975 I 0.824
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.823
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.823
Pm015434 Prunus mume Pm015434 I 0.823
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.823
mgf018581m Mimulus guttatus mgf018581m I 0.822
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.821
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.821
MDP0000261154 Malus domestica MDP0000261154 N 0.821
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.821
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.821
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I 0.821
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.820
PK07533.1 Cannabis sativa PK07533.1 I 0.820
28976.m000155 Ricinus communis 28976.m000155 N 0.818
mgf017392m Mimulus guttatus mgf017392m I 0.818
Cla016841 Citrullus lanatus Cla016841 I 0.817
Cla016748 Citrullus lanatus Cla016748 I 0.817
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.817
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.817
MDP0000239026 Malus domestica MDP0000239026 I 0.817
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.816
MDP0000863909 Malus domestica MDP0000863909 I 0.813
MDP0000205823 Malus domestica MDP0000205823 I 0.812
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.812
MDP0000183562 Malus domestica MDP0000183562 I 0.812
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.812
MDP0000891108 Malus domestica MDP0000891108 I 0.812
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.810
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I 0.810
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.810
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.809
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.809
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.807
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.807
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.807
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.807
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.805
VIT_00s0541g00020 Vitis vinifera VIT_00s0541g00020 N 0.805
PK01815.1 Cannabis sativa PK01815.1 N 0.805
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.804
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.804
Bra008670 Brassica rapa Bra008670 I 0.803
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.803
Bo9g163740 Brassica oleracea Bo9g163740 I 0.803
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.802
Bra023540 Brassica rapa Bra023540 I 0.802
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.802
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.802
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.801
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.801
Lus10024279.g Linum usitatissimum Lus10024279.g N 0.800
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I 0.798
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I 0.798
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.798
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.797
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.797
Bo2g012800 Brassica oleracea Bo2g012800 I 0.797
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.797
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.796
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.795
Solyc03g043900.1 Solanum lycopersicum Solyc03g043900.1 N 0.794
Ca_15971 Cicer arietinum Ca_15971 N 0.794
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.793
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.793
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I 0.793
Bo3g010620 Brassica oleracea Bo3g010620 I 0.793
Ca_01004 Cicer arietinum Ca_01004 I 0.792
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.792
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.792
Bo3g010750 Brassica oleracea Bo3g010750 I 0.791
Bra006324 Brassica rapa Bra006324 I 0.791
Eucgr.L01789 Eucalyptus grandis Eucgr.L01789 N 0.791
Eucgr.G01645 Eucalyptus grandis Eucgr.G01645 N 0.791
MDP0000891899 Malus domestica MDP0000891899 I 0.791
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.791
mgf021986m Mimulus guttatus mgf021986m I 0.791
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I 0.790
30076.m004659 Ricinus communis 30076.m004659 I 0.790
Cla008074 Citrullus lanatus Cla008074 I 0.790
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.790
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.790
mgf013074m Mimulus guttatus mgf013074m I 0.789
mgf007535m Mimulus guttatus mgf007535m I 0.789
GSMUA_Achr9G14690_001 Musa acuminata GSMUA_Achr9G14690_001 I 0.789
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N 0.788
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.788
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N 0.788
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.787
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.787
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.786
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I 0.786
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.786
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.786
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I 0.786
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.786
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.786
OS02G0728001 Oryza sativa OS02G0728001 D 0.786
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.786
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.786
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.786
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.786
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.786
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.786
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.786
OS08G0487100 Oryza sativa OS08G0487100 I 0.786
OBART02G31030 Oryza barthii OBART02G31030 I 0.786
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.786
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.786
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.786
MLOC_62430 Hordeum vulgare MLOC_62430 I 0.786
Cla015037 Citrullus lanatus Cla015037 I 0.786
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.786
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.786
OBART08G18720 Oryza barthii OBART08G18720 I 0.786
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.786
mgf009803m Mimulus guttatus mgf009803m I 0.785
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.785
PGSC0003DMG400005476 Solanum tuberosum PGSC0003DMG400005476 N 0.785
Bra039631 Brassica rapa Bra039631 I 0.785
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.785
29598.m000468 Ricinus communis 29598.m000468 I 0.785
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.785
Gorai.012G155000 Gossypium raimondii Gorai.012G155000 N 0.784
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.784
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.784
mgf004063m Mimulus guttatus mgf004063m N 0.783
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.782
Bra003500 Brassica rapa Bra003500 I 0.782
Bo6g079450 Brassica oleracea Bo6g079450 I 0.782
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.782