Eucgr.F02337 (Eucalyptus grandis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Eucgr.F02337 T071692_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.850 0.839
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.850 0.839
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.824 0.758
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.814 0.880
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.824 0.758
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.824 0.758
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.819 0.774
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.812 0.694
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.796 0.760
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.812 0.694
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.812 0.694
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.796 0.760
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.812 0.694
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.812 0.694
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.812 0.694
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.786 0.720
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.786 0.597
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.786 0.597
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.786 0.597
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.786 0.597
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02337.1 bZIP 357 418
Eucgr.F02337.2 bZIP 357 418
Eucgr.F02337.3 bZIP 357 418
Eucgr.F02337.4 bZIP 357 406

Links

Other bZIP family TFs
Other Eucalyptus grandis TFs

386 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.00152_#_110 Aspergillus carbonarius fgenesh1_pg.00152_#_110 N 0.000
ACLA_012500 Aspergillus clavatus CADACLAG00000810 N 0.000
CADAFLAG00006788 Aspergillus flavus CADAFLAG00006788 N 0.000
AFUA_5G08020 Aspergillus fumigatus CADAFUAG00006411 N 0.000
ANIA_07734 Aspergillus nidulans CADANIAG00000869 N 0.000
CADAORAG00011011 Aspergillus oryzae CADAORAG00011011 N 0.000
EURHEDRAFT_504993 Aspergillus ruber EURHEDRAFT_504993 N 0.000
PVAR5_6082 Byssochlamys spectabilis PVAR5_6082 N 0.000
NFIA_079280 Neosartorya fischeri CADNFIAG00007920 N 0.000
Pc22g15870 Penicillium chrysogenum Pc22g15870 N 0.000
PDIP_52280 Penicillium digitatum PDIP_52280 N 0.000
PEX1_013040 Penicillium expansum PEX1_013040 N 0.000
PITC_078720 Penicillium italicum PITC_078720 N 0.000
PMAA_083970 Penicillium marneffei PMAA_083970 N 0.000
PDE_09585 Penicillium oxalicum PDE_09585 N 0.000
PCH_Pc22g15870 Penicillium rubens PCH_Pc22g15870 N 0.000
U727_00432160131 Penicillium solitum U727_00432160131 N 0.000
PMAA_083970 Talaromyces marneffei PMAA_083970 N 0.000
TSTA_118850 Talaromyces stipitatus TSTA_118850 N 0.000