Eucgr.K01643 (Eucalyptus grandis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Eucgr.K01643 T071728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA

TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.805 0.961
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA

TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.805 0.941
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN

NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.805 0.941
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN

NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.805 0.941
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN

NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.805 0.941
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN

NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.805 0.941
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD

HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.805 0.941
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH

DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.805 0.941
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN

NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.805 0.941
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN

NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.805 0.941
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN

NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.805 0.941
TGA2
M09917_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.805 0.941
TGA2
M09918_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.805 0.941
HBP1B_WHEAT
M10043_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.805 0.922
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN

NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.790 0.882
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC

GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.790 0.882
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD

HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.790 0.882
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K01643.1 bZIP 161 211
Eucgr.K01643.2 bZIP 161 215

Links

Other bZIP family TFs
Other Eucalyptus grandis TFs

Invalid Input OrderBy

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action