CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0200010492
(
Micromonas sp RCC299
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
EuGene.0200010492
T071738_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HY5
M06790_2.00
Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH
Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a
0.829
0.656
HY5
M08407_2.00
Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN
ChIP-chip
Mathelier et al.(2014)
MA0551.1
0.829
0.656
HY5
M09919_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HY5_01
0.829
0.656
Q39895_SOYBN
M10048_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_01
0.829
0.625
Q39895_SOYBN
M10049_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_02
0.829
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
56115
bZIP
127
191
EKERKRLKRLLRNRVSAQQARERKKAYMSTLEDERRNMETKMAELEAKINTLERENFMLRQVVKN
Links
Other
bZIP
family TFs
Other
Micromonas sp RCC299
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy