gene14556-v1.0-hybrid (Fragaria vesca)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gene14556-v1.0-hybrid T071831_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN

NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.808 0.661
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.783 0.581
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.783 0.581
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.783 0.581
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.783 0.581
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.783 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna14556.1-v1.0-hybrid bZIP 156 217

Links

Other bZIP family TFs
Other Fragaria vesca TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_000152 Theobroma cacao TCM_000152 I 0.879
chr2.CM0695.170.nc Lotus japonicus chr2.CM0695.170.nc I 0.842
Gorai.003G007000 Gossypium raimondii Gorai.003G007000 N 0.838
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.834
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N 0.833
Solyc02g083520.2 Solanum lycopersicum Solyc02g083520.2 I 0.828
Gorai.007G191800 Gossypium raimondii Gorai.007G191800 I 0.825
Cla009066 Citrullus lanatus Cla009066 I 0.825
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.824
OBART01G37980 Oryza barthii OBART01G37980 I 0.824
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.824
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.824
OB01G46760 Oryza brachyantha OB01G46760 I 0.824
OS01G0859300 Oryza sativa OS01G0859300 I 0.824
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.824
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.824
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.824
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.824
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.824
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.824
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.824
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.822
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.822
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.822
F775_32479 Aegilops tauschii F775_32479 I 0.822
FD Arabidopsis thaliana AT4G35900 I 0.814
FD Arabidopsis lyrata Al_scaffold_0007_453 I 0.814
PK24978.1 Cannabis sativa PK24978.1 D 0.808
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.806
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.806
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.805
SapurV1A.0016s1330 Salix purpurea SapurV1A.0016s1330 I 0.805
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.802
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.798
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.797
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.797
Pm001315 Prunus mume Pm001315 I 0.796
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.794
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.793
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.793
AMTR_s00152p00081700 Amborella trichopoda AMTR_s00152p00081700 I 0.791
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.790
Lus10019542.g Linum usitatissimum Lus10019542.g N 0.790
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.790
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.788
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.788
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.788
F775_17024 Aegilops tauschii F775_17024 I 0.788
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.788
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.788
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.787
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.787
Thhalv10023128m.g Eutrema salsugineum Thhalv10023128m.g N 0.787
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.787
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.787
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.787
SapurV1A.0025s0010 Salix purpurea SapurV1A.0025s0010 I 0.787
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.786
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.786
29625.m000702 Ricinus communis 29625.m000702 I 0.786
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.786
F775_28711 Aegilops tauschii F775_28711 I 0.786
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.786
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.785
MDP0000740787 Malus domestica MDP0000740787 I 0.785
Carubv10006580m.g Capsella rubella Carubv10006580m.g I 0.785
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.784
BZIP27 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3003160 I 0.784
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.784
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.783
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.783
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.783
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.783
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.783
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.783
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.783
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.783
OB05G28440 Oryza brachyantha OB05G28440 I 0.783
OBART05G21000 Oryza barthii OBART05G21000 I 0.783
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.783
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.783
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.783
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.783
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.783
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.783
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.783
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.783
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.783
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.783
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.783
DPBF3 Arabidopsis thaliana AT3G56850 D 0.783
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.783
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.783
OS05G0489700 Oryza sativa OS05G0489700 I 0.783
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.783
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.783
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.783
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.782
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.782
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.782
TCM_044596 Theobroma cacao TCM_044596 I 0.782
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.782
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.782
MDP0000169473 Malus domestica MDP0000169473 N 0.782
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.782