CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene21797-v1.0-hybrid
(
Fragaria vesca
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
gene21797-v1.0-hybrid
T071839_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.791
0.882
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.791
0.882
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA
TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.791
0.882
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.791
0.882
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.791
0.882
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.791
0.863
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.791
0.863
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN
NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.791
0.863
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.791
0.863
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.791
0.863
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.791
0.863
TGA2
M09917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.791
0.863
TGA2
M09918_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.791
0.863
HBP1B_WHEAT
M10043_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.791
0.843
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna21797.1-v1.0-hybrid
bZIP
235
285
QLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARAQ
Links
Other
bZIP
family TFs
Other
Fragaria vesca
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08357
Capronia coronata
A1O1_08357
N
0.000
A1O3_03359
Capronia epimyces
A1O3_03359
N
0.000
A1O5_11328
Cladophialophora psammophila
A1O5_11328
N
0.000
A1O7_03427
Cladophialophora yegresii
A1O7_03427
N
0.000
A1O9_03518
Exophiala aquamarina
A1O9_03518
N
0.000
AB09962.1
Alternaria brassicicola
AB09962.1
N
0.000
AOL_s00083g275
Arthrobotrys oligospora
AOL_s00083g275
N
0.000
Bcin08g02020
Botrytis cinerea
Bcin08g02020
N
0.000
BDDG_05933
Blastomyces dermatitidis
BDDG_05933
N
0.000
BN7_5638
Wickerhamomyces ciferrii
BN7_5638
N
0.000
ACLA_097570
Aspergillus clavatus
CADACLAG00009030
N
0.000
CADAFLAG00008856
Aspergillus flavus
CADAFLAG00008856
N
0.000
AFUA_6G02850
Aspergillus fumigatus
CADAFUAG00000590
N
0.000
ANIA_08753
Aspergillus nidulans
CADANIAG00006313
N
0.000
EPUS_05553
Endocarpon pusillum
EPUS_05553
N
0.000
fgenesh1_pg.00855_#_193
Aspergillus carbonarius
fgenesh1_pg.00855_#_193
N
0.000
H101_07534
Trichophyton interdigitale
H101_07534
N
0.000
HCBG_02929
Histoplasma capsulatum
HCBG_02929
N
0.000
HMPREF1120_05421
Exophiala dermatitidis
HMPREF1120_05421
N
0.000
HMPREF1541_04290
Cyphellophora europaea
HMPREF1541_04290
N
0.000
MBM_09326
Marssonina brunnea
MBM_09326
N
0.000
MCYG_03026
Arthroderma otae
MCYG_03026
N
0.000
MCYG_03026
Microsporum canis
MCYG_03026
N
0.000
PABG_04273
Paracoccidioides brasiliensis
PABG_04273
N
0.000
PMAA_093380
Talaromyces marneffei
PMAA_093380
N
0.000
PMAA_093380
Penicillium marneffei
PMAA_093380
N
0.000
PV04_03627
Capronia semiimmersa
PV04_03627
N
0.000
PV05_05780
Exophiala xenobiotica
PV05_05780
N
0.000
PV06_00118
Exophiala oligosperma
PV06_00118
N
0.000
PV07_06604
Cladophialophora immunda
PV07_06604
N
0.000
PV08_04563
Exophiala spinifera
PV08_04563
N
0.000
PV11_01328
Exophiala sideris
PV11_01328
N
0.000
PVAR5_7542
Byssochlamys spectabilis
PVAR5_7542
N
0.000
SBOR_5447
Sclerotinia borealis
SBOR_5447
N
0.000
SNOG_07829
Stagonospora nodorum
SNOG_07829
N
0.000
SNOG_07829
Phaeosphaeria nodorum
SNOG_07829
N
0.000
SS1G_03399
Sclerotinia sclerotiorum
SS1G_03399
N
0.000
TSTA_047980
Talaromyces stipitatus
TSTA_047980
N
0.000
UCRNP2_7879
Neofusicoccum parvum
UCRNP2_7879
N
0.000
Z517_10300
Fonsecaea pedrosoi
Z517_10300
N
0.000
Z518_01378
Rhinocladiella mackenziei
Z518_01378
N
0.000
Z519_02131
Cladophialophora bantiana
Z519_02131
N
0.000