CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene30280-v1.0-hybrid
(
Fragaria vesca
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
gene30280-v1.0-hybrid
T071853_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.789
0.679
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.789
0.679
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.783
0.589
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.783
0.589
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.783
0.589
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.783
0.589
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.783
0.589
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.782
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna30280.1-v1.0-hybrid
bZIP
350
405
VERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENANLKQALTELEMKRKQ
Links
Other
bZIP
family TFs
Other
Fragaria vesca
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa019833mg
Prunus persica
PRUPE_ppa019833mg
I
0.804
MDP0000144105
Malus domestica
MDP0000144105
I
0.804
Cla017970
Citrullus lanatus
Cla017970
I
0.804
MDP0000231542
Malus domestica
MDP0000231542
I
0.804
Pm026185
Prunus mume
Pm026185
I
0.804
MDP0000177486
Malus domestica
MDP0000177486
I
0.804
Ca_00791
Cicer arietinum
Ca_00791
I
0.803
chr1.CM0010.310.nd
Lotus japonicus
chr1.CM0010.310.nd
I
0.801
GLYMA19G37910
Glycine max
GLYMA19G37910
I
0.801
MTR_7g104480
Medicago truncatula
MTR_7g104480
I
0.801
Gorai.002G240500
Gossypium raimondii
Gorai.002G240500
I
0.794
mgf015092m
Mimulus guttatus
mgf015092m
I
0.794
evm.TU.supercontig_5.28
Carica papaya
evm.TU.supercontig_5.28
I
0.794
Cucsa.241090
Cucumis sativus
Cucsa.241090
I
0.794
Solyc09g009490.2
Solanum lycopersicum
Solyc09g009490.2
I
0.794
PGSC0003DMG400002660
Solanum tuberosum
PGSC0003DMG400002660
I
0.794
TCM_022574
Theobroma cacao
TCM_022574
I
0.794
Gorai.006G155600
Gossypium raimondii
Gorai.006G155600
I
0.794
29625.m000702
Ricinus communis
29625.m000702
I
0.792
Aquca_007_00660
Aquilegia coerulea
Aquca_007_00660
I
0.792
Pavir.J35078
Panicum virgatum
Pavir.J35078
I
0.792
GRMZM2G002075
Zea mays
GRMZM2G002075
I
0.792
OB01G46760
Oryza brachyantha
OB01G46760
I
0.791
ORGLA01G0317900
Oryza glaberrima
ORGLA01G0317900
I
0.791
ORUFI01G41310
Oryza rufipogon
ORUFI01G41310
I
0.791
OS01G0859300
Oryza sativa
OS01G0859300
I
0.791
SELMODRAFT_266892
Selaginella moellendorffii
SELMODRAFT_266892
I
0.791
LPERR01G32620
Leersia perrieri
LPERR01G32620
I
0.791
ONIVA04G25730
Oryza nivara
ONIVA04G25730
I
0.791
OGLUM01G42150
Oryza glumaepatula
OGLUM01G42150
I
0.791
OLONG_014546
Oryza longistaminata
OLONG_014546
I
0.791
OBART01G37980
Oryza barthii
OBART01G37980
I
0.791
OMERI01G34950
Oryza meridionalis
OMERI01G34950
I
0.791
MDP0000296303
Malus domestica
MDP0000296303
I
0.791
GRMZM2G168079
Zea mays
GRMZM2G168079
I
0.791
BGIOSGA004837
Oryza indica
BGIOSGA004837
I
0.791
Eucgr.F02337
Eucalyptus grandis
Eucgr.F02337
I
0.790
VIT_18s0001g04500
Vitis vinifera
VIT_18s0001g04500
I
0.790
cassava11518.m1
Manihot esculenta
cassava11518.m1
I
0.790
OPUNC05G18710
Oryza punctata
OPUNC05G18710
I
0.790
ABI5
Arabidopsis thaliana
AT2G36270
D
0.790
SELMODRAFT_94516
Selaginella moellendorffii
SELMODRAFT_94516
I
0.790
PRUPE_ppa006503mg
Prunus persica
PRUPE_ppa006503mg
I
0.790
SELMODRAFT_91900
Selaginella moellendorffii
SELMODRAFT_91900
I
0.790
GSMUA_Achr3G22710_001
Musa acuminata
GSMUA_Achr3G22710_001
I
0.790
Lus10021369.g
Linum usitatissimum
Lus10021369.g
I
0.790
cassava32856.m1
Manihot esculenta
cassava32856.m1
I
0.790
ABI5
Populus trichocarpa
POPTR_0006s08300
I
0.790
Lus10014194.g
Linum usitatissimum
Lus10014194.g
I
0.790
Lus10022720.g
Linum usitatissimum
Lus10022720.g
I
0.790
Lus10017049.g
Linum usitatissimum
Lus10017049.g
I
0.790
Lus10009755.g
Linum usitatissimum
Lus10009755.g
I
0.790
GLYMA10G08370
Glycine max
GLYMA10G08370
I
0.790
GLYMA13G22061
Glycine max
GLYMA13G22061
I
0.790
Pm005288
Prunus mume
Pm005288
I
0.789
Sb03g040510
Sorghum bicolor
Sb03g040510
I
0.789
Cla022926
Citrullus lanatus
Cla022926
I
0.789
SapurV1A.0878s0160
Salix purpurea
SapurV1A.0878s0160
I
0.789
POPTR_0014s02810
Populus trichocarpa
POPTR_0014s02810
I
0.789
30170.m013868
Ricinus communis
30170.m013868
I
0.789
Thhalv10011493m.g
Eutrema salsugineum
Thhalv10011493m.g
I
0.789
AMTR_s00132p00065700
Amborella trichopoda
AMTR_s00132p00065700
I
0.789
Traes_3AL_FC5523394
Triticum aestivum
Traes_3AL_FC5523394
I
0.789
TRIUR3_31111
Triticum urartu
TRIUR3_31111
I
0.789
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
0.789
TRAES3BF111600130CFD_g
Triticum aestivum
TRAES3BF111600130CFD_g
I
0.789
TRAES3BF111600160CFD_g
Triticum aestivum
TRAES3BF111600160CFD_g
I
0.789
DPBF2
Vitis vinifera
VIT_06s0080g00340
I
0.789
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
0.789
Solyc04g078840.2
Solanum lycopersicum
Solyc04g078840.2
I
0.789
ABF2
Arabidopsis thaliana
AT1G45249
D
0.789
POPTR_0002s12710
Populus trichocarpa
POPTR_0002s12710
I
0.789
TCM_033824
Theobroma cacao
TCM_033824
I
0.789
Si001731m.g
Setaria italica
Si001731m.g
I
0.789
cassava42669.valid.m1
Manihot esculenta
cassava42669.valid.m1
I
0.789
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.789
MDP0000701734
Malus domestica
MDP0000701734
I
0.789
cassava12275.valid.m1
Manihot esculenta
cassava12275.valid.m1
I
0.789
ABF2
Arabidopsis lyrata
fgenesh2_kg.1__3804__AT1G45249.1
I
0.789
Cagra.10917s0002
Capsella grandiflora
Cagra.10917s0002
I
0.789
Carubv10009177m.g
Capsella rubella
Carubv10009177m.g
I
0.789
MLOC_34679
Hordeum vulgare
MLOC_34679
I
0.789
gene09110-v1.0-hybrid
Fragaria vesca
gene09110-v1.0-hybrid
I
0.789
evm.TU.supercontig_49.26
Carica papaya
evm.TU.supercontig_49.26
I
0.789
Ciclev10001159m.g
Citrus clementina
Ciclev10001159m.g
I
0.789
orange1.1g021624m.g
Citrus sinensis
orange1.1g021624m.g
I
0.789
Aquca_072_00142
Aquilegia coerulea
Aquca_072_00142
I
0.789
PGSC0003DMG400008011
Solanum tuberosum
PGSC0003DMG400008011
I
0.789
Cucsa.385090
Cucumis sativus
Cucsa.385090
I
0.789
Bo6g006970
Brassica oleracea
Bo6g006970
I
0.789
SapurV1A.0167s0060
Salix purpurea
SapurV1A.0167s0060
I
0.789
Cucsa.396070
Cucumis sativus
Cucsa.396070
I
0.789
Bra040260
Brassica rapa
Bra040260
I
0.789
orange1.1g025340m.g
Citrus sinensis
orange1.1g025340m.g
I
0.789
F775_32479
Aegilops tauschii
F775_32479
I
0.789
mgf020824m
Mimulus guttatus
mgf020824m
I
0.788
SELMODRAFT_443424
Selaginella moellendorffii
SELMODRAFT_443424
I
0.788
TRIUR3_29638
Triticum urartu
TRIUR3_29638
I
0.787
GLYMA06G04353
Glycine max
GLYMA06G04353
I
0.787
Ca_01548
Cicer arietinum
Ca_01548
I
0.787
GLYMA04G04170
Glycine max
GLYMA04G04170
I
0.787
mgf002176m
Mimulus guttatus
mgf002176m
I
0.787
MTR_3g101780
Medicago truncatula
MTR_3g101780
I
0.786
LjT07K13.110.nd
Lotus japonicus
LjT07K13.110.nd
I
0.786
GLYMA06G47220
Glycine max
GLYMA06G47220
I
0.786
Traes_3DL_20ED2EA4C
Triticum aestivum
Traes_3DL_20ED2EA4C
I
0.785
Traes_1BL_DE2CF9613
Triticum aestivum
Traes_1BL_DE2CF9613
I
0.785
OGLUM03G15730
Oryza glumaepatula
OGLUM03G15730
I
0.785
Traes_1AL_1FFBFB058
Triticum aestivum
Traes_1AL_1FFBFB058
I
0.785
F775_43558
Aegilops tauschii
F775_43558
I
0.785
MLOC_6534
Hordeum vulgare
MLOC_6534
I
0.785
OPUNC01G33790
Oryza punctata
OPUNC01G33790
I
0.784
OGLUM05G22240
Oryza glumaepatula
OGLUM05G22240
I
0.783
Eucgr.J00320
Eucalyptus grandis
Eucgr.J00320
I
0.783
OBART07G26790
Oryza barthii
OBART07G26790
I
0.783
MTR_7g088090
Medicago truncatula
MTR_7g088090
I
0.783
OB07G32300
Oryza brachyantha
OB07G32300
I
0.783
Eucgr.K01706
Eucalyptus grandis
Eucgr.K01706
I
0.783
Ciclev10012205m.g
Citrus clementina
Ciclev10012205m.g
I
0.783
Cagra.1642s0072
Capsella grandiflora
Cagra.1642s0072
I
0.783
OMERI07G23410
Oryza meridionalis
OMERI07G23410
I
0.783
Cagra.0578s0014
Capsella grandiflora
Cagra.0578s0014
I
0.783
Traes_4AS_F9C171219
Triticum aestivum
Traes_4AS_F9C171219
I
0.783
Carubv10018770m.g
Capsella rubella
Carubv10018770m.g
I
0.783
Ciclev10001893m.g
Citrus clementina
Ciclev10001893m.g
I
0.783
OGLUM07G26780
Oryza glumaepatula
OGLUM07G26780
I
0.783
Carubv10023893m.g
Capsella rubella
Carubv10023893m.g
I
0.783
MLOC_61490
Hordeum vulgare
MLOC_61490
I
0.783
GSMUA_Achr2G20490_001
Musa acuminata
GSMUA_Achr2G20490_001
I
0.783
SapurV1A.0070s0720
Salix purpurea
SapurV1A.0070s0720
I
0.783
SapurV1A.0036s0930
Salix purpurea
SapurV1A.0036s0930
I
0.783
Pavir.Bb03699
Panicum virgatum
Pavir.Bb03699
I
0.783
BGIOSGA026419
Oryza indica
BGIOSGA026419
I
0.783
Thhalv10006121m.g
Eutrema salsugineum
Thhalv10006121m.g
I
0.783
LjSGA_023611.1
Lotus japonicus
LjSGA_023611.1
I
0.783
DPBF3
Arabidopsis thaliana
AT3G56850
D
0.783
BGIOSGA010835
Oryza indica
BGIOSGA010835
I
0.783
Pavir.Ba00263
Panicum virgatum
Pavir.Ba00263
I
0.783
F775_31964
Aegilops tauschii
F775_31964
I
0.783
GLYMA15G35080
Glycine max
GLYMA15G35080
I
0.783
GLYMA19G30230
Glycine max
GLYMA19G30230
I
0.783
Bostr.20505s0068
Boechera stricta
Bostr.20505s0068
I
0.783
MDP0000273211
Malus domestica
MDP0000273211
I
0.783
GLYMA03G00580
Glycine max
GLYMA03G00580
I
0.783
orange1.1g021146m.g
Citrus sinensis
orange1.1g021146m.g
I
0.783
orange1.1g020697m.g
Citrus sinensis
orange1.1g020697m.g
I
0.783
GSMUA_Achr5G24570_001
Musa acuminata
GSMUA_Achr5G24570_001
I
0.783
OMERI03G14020
Oryza meridionalis
OMERI03G14020
I
0.783
Cla013878
Citrullus lanatus
Cla013878
I
0.783
Solyc10g081350.1
Solanum lycopersicum
Solyc10g081350.1
I
0.783
SELMODRAFT_451399
Selaginella moellendorffii
SELMODRAFT_451399
I
0.783
SELMODRAFT_227594
Selaginella moellendorffii
SELMODRAFT_227594
I
0.783
AREB3
Arabidopsis lyrata
scaffold_502836.1
I
0.783
ONIVA03G16560
Oryza nivara
ONIVA03G16560
I
0.783
TCM_044596
Theobroma cacao
TCM_044596
I
0.783
TRIUR3_33995
Triticum urartu
TRIUR3_33995
I
0.783
Traes_4DL_F38ED7FB6
Triticum aestivum
Traes_4DL_F38ED7FB6
I
0.783
Traes_4BL_4C9A415F3
Triticum aestivum
Traes_4BL_4C9A415F3
I
0.783
TRIUR3_06726
Triticum urartu
TRIUR3_06726
I
0.783
TRIUR3_12792
Triticum urartu
TRIUR3_12792
I
0.783
Traes_3AL_58F294736
Triticum aestivum
Traes_3AL_58F294736
I
0.783
TRIUR3_15490
Triticum urartu
TRIUR3_15490
I
0.783
Sb06g026410
Sorghum bicolor
Sb06g026410
I
0.783
Pm016826
Prunus mume
Pm016826
I
0.783
OPUNC07G25180
Oryza punctata
OPUNC07G25180
I
0.783
ONIVA07G26520
Oryza nivara
ONIVA07G26520
I
0.783
Cucsa.364380
Cucumis sativus
Cucsa.364380
I
0.783
ORUFI07G27740
Oryza rufipogon
ORUFI07G27740
I
0.783
ORGLA03G0149400
Oryza glaberrima
ORGLA03G0149400
I
0.783
Aquca_009_00009
Aquilegia coerulea
Aquca_009_00009
I
0.783
OS07G0686100
Oryza sativa
OS07G0686100
I
0.783
PGSC0003DMG400028121
Solanum tuberosum
PGSC0003DMG400028121
I
0.783
PGSC0003DMG400007208
Solanum tuberosum
PGSC0003DMG400007208
I
0.783
BRADI4G43850
Brachypodium distachyon
BRADI4G43850
I
0.782
mgf002556m
Mimulus guttatus
mgf002556m
I
0.782
AMTR_s00101p00038080
Amborella trichopoda
AMTR_s00101p00038080
I
0.782
EEL
Arabidopsis thaliana
AT2G41070
I
0.782
Bostr.9345s0024
Boechera stricta
Bostr.9345s0024
I
0.782
Traes_1DL_D9BA83221
Triticum aestivum
Traes_1DL_D9BA83221
I
0.782
ONIVA05G21710
Oryza nivara
ONIVA05G21710
I
0.782
Thhalv10017050m.g
Eutrema salsugineum
Thhalv10017050m.g
I
0.782
VIT_13s0175g00120
Vitis vinifera
VIT_13s0175g00120
I
0.782
Bo4g012940
Brassica oleracea
Bo4g012940
I
0.782
mgf011003m
Mimulus guttatus
mgf011003m
I
0.782
SapurV1A.0001s2050
Salix purpurea
SapurV1A.0001s2050
I
0.782
EEL
Arabidopsis lyrata
fgenesh2_kg.4__2235__AT2G41070.2
I
0.782
GSMUA_Achr8G07740_001
Musa acuminata
GSMUA_Achr8G07740_001
I
0.782
SELMODRAFT_177659
Selaginella moellendorffii
SELMODRAFT_177659
I
0.782
Gorai.009G301400
Gossypium raimondii
Gorai.009G301400
I
0.782
Gorai.009G301200
Gossypium raimondii
Gorai.009G301200
I
0.782
PRUPE_ppa008716mg
Prunus persica
PRUPE_ppa008716mg
I
0.782
30055.m001548
Ricinus communis
30055.m001548
I
0.782
OS08G0471950
Oryza sativa
OS08G0471950
D
0.782
SELMODRAFT_428822
Selaginella moellendorffii
SELMODRAFT_428822
I
0.782
OS03G0322700
Oryza sativa
OS03G0322700
I
0.782
gene00393-v1.0-hybrid
Fragaria vesca
gene00393-v1.0-hybrid
I
0.782
GLYMA04G14840
Glycine max
GLYMA04G14840
I
0.782
MDP0000215106
Malus domestica
MDP0000215106
I
0.782
GLYMA08G24340
Glycine max
GLYMA08G24340
I
0.782
Ca_08143
Cicer arietinum
Ca_08143
I
0.782