CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.003G032100
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.003G032100
T071897_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.808
0.581
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.808
0.581
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.786
0.484
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.786
0.484
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN
NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.784
0.565
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG
CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.784
0.565
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G032100.1
bZIP
77
138
DERKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRIENRELNNRLKFLLYHCHCVKTDND
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_000835
Theobroma cacao
TCM_000835
I
0.883
Ciclev10027584m.g
Citrus clementina
Ciclev10027584m.g
I
0.880
orange1.1g029952m.g
Citrus sinensis
orange1.1g029952m.g
I
0.880
PRUPE_ppa011366mg
Prunus persica
PRUPE_ppa011366mg
I
0.880
Pm002353
Prunus mume
Pm002353
I
0.880
Aquca_006_00040
Aquilegia coerulea
Aquca_006_00040
I
0.873
Lus10011722.g
Linum usitatissimum
Lus10011722.g
I
0.869
MDP0000738631
Malus domestica
MDP0000738631
I
0.863
cassava24775.valid.m1
Manihot esculenta
cassava24775.valid.m1
I
0.859
30131.m007078
Ricinus communis
30131.m007078
I
0.859
Eucgr.H02330
Eucalyptus grandis
Eucgr.H02330
I
0.859
POPTR_0007s14740
Populus trichocarpa
POPTR_0007s14740
I
0.857
Gorai.008G085200
Gossypium raimondii
Gorai.008G085200
I
0.855
Ca_09362
Cicer arietinum
Ca_09362
I
0.855
POPTR_0004s16560
Populus trichocarpa
POPTR_0004s16560
I
0.850
MTR_5g015090
Medicago truncatula
MTR_5g015090
I
0.849
cassava35454.valid.m1
Manihot esculenta
cassava35454.valid.m1
I
0.847
evm.TU.supercontig_129.74
Carica papaya
evm.TU.supercontig_129.74
I
0.846
GLYMA17G17100
Glycine max
GLYMA17G17100
I
0.844
chr2.CM0021.50.nd
Lotus japonicus
chr2.CM0021.50.nd
I
0.843
Lus10019273.g
Linum usitatissimum
Lus10019273.g
N
0.843
GLYMA01G40370
Glycine max
GLYMA01G40370
I
0.843
GSMUA_Achr4G03790_001
Musa acuminata
GSMUA_Achr4G03790_001
I
0.841
cassava41140.m1
Manihot esculenta
cassava41140.m1
I
0.840
POPTR_0009s12250
Populus trichocarpa
POPTR_0009s12250
I
0.839
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.838
cassava40461.m1
Manihot esculenta
cassava40461.m1
I
0.838
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.838
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.838
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.838
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.838
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.836
mgf003466m
Mimulus guttatus
mgf003466m
I
0.832
MTR_4g097440
Medicago truncatula
MTR_4g097440
I
0.832
Aquca_006_00360
Aquilegia coerulea
Aquca_006_00360
I
0.831
Ciclev10029834m.g
Citrus clementina
Ciclev10029834m.g
I
0.830
GLYMA11G04920
Glycine max
GLYMA11G04920
I
0.830
orange1.1g044691m.g
Citrus sinensis
orange1.1g044691m.g
I
0.830
Cucsa.284240
Cucumis sativus
Cucsa.284240
I
0.828
Cla020641
Citrullus lanatus
Cla020641
I
0.828
SapurV1A.0608s0130
Salix purpurea
SapurV1A.0608s0130
N
0.827
SapurV1A.0060s0610
Salix purpurea
SapurV1A.0060s0610
I
0.826
mgf018581m
Mimulus guttatus
mgf018581m
I
0.826
Gorai.007G056900
Gossypium raimondii
Gorai.007G056900
I
0.826
GLYMA19G05050
Glycine max
GLYMA19G05050
I
0.826
PK07533.1
Cannabis sativa
PK07533.1
I
0.825
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.825
POPTR_0010s14530
Populus trichocarpa
POPTR_0010s14530
I
0.824
Cla005975
Citrullus lanatus
Cla005975
I
0.824
PRUPE_ppa011589mg
Prunus persica
PRUPE_ppa011589mg
I
0.824
cassava32522.m1
Manihot esculenta
cassava32522.m1
I
0.824
30138.m003866
Ricinus communis
30138.m003866
I
0.824
POPTR_0008s11260
Populus trichocarpa
POPTR_0008s11260
I
0.824
MTR_7g029400
Medicago truncatula
MTR_7g029400
I
0.824
cassava46237.m1
Manihot esculenta
cassava46237.m1
I
0.824
Lus10013059.g
Linum usitatissimum
Lus10013059.g
I
0.824
GLYMA01G09510
Glycine max
GLYMA01G09510
I
0.824
Lus10029101.g
Linum usitatissimum
Lus10029101.g
I
0.824
chr2.CM0124.640.nd
Lotus japonicus
chr2.CM0124.640.nd
I
0.824
SapurV1A.0084s0340
Salix purpurea
SapurV1A.0084s0340
I
0.824
Gorai.001G251000
Gossypium raimondii
Gorai.001G251000
I
0.824
GLYMA02G13960
Glycine max
GLYMA02G13960
I
0.824
gene04504-v1.0-hybrid
Fragaria vesca
gene04504-v1.0-hybrid
I
0.824
VIT_01s0010g00930
Vitis vinifera
VIT_01s0010g00930
I
0.824
MDP0000261154
Malus domestica
MDP0000261154
N
0.823
PGSC0003DMG400021431
Solanum tuberosum
PGSC0003DMG400021431
I
0.822
cassava9577.m1
Manihot esculenta
cassava9577.m1
I
0.822
Pm015434
Prunus mume
Pm015434
I
0.822
PRUPE_ppa011644mg
Prunus persica
PRUPE_ppa011644mg
I
0.822
mgf017392m
Mimulus guttatus
mgf017392m
I
0.822
Cucsa.174700
Cucumis sativus
Cucsa.174700
I
0.822
Cucsa.238410
Cucumis sativus
Cucsa.238410
I
0.821
Cla016841
Citrullus lanatus
Cla016841
I
0.821
Cla016748
Citrullus lanatus
Cla016748
I
0.821
MDP0000239026
Malus domestica
MDP0000239026
I
0.821
Solyc02g092090.1
Solanum lycopersicum
Solyc02g092090.1
I
0.820
28976.m000155
Ricinus communis
28976.m000155
N
0.817
MDP0000205823
Malus domestica
MDP0000205823
I
0.816
MDP0000183562
Malus domestica
MDP0000183562
I
0.816
GSMUA_Achr10G12910_001
Musa acuminata
GSMUA_Achr10G12910_001
I
0.816
MDP0000891108
Malus domestica
MDP0000891108
I
0.816
SapurV1A.0235s0220
Salix purpurea
SapurV1A.0235s0220
N
0.815
SapurV1A.0396s0080
Salix purpurea
SapurV1A.0396s0080
I
0.814
Cucsa.103380
Cucumis sativus
Cucsa.103380
N
0.813
Cla014262
Citrullus lanatus
Cla014262
N
0.813
MDP0000863909
Malus domestica
MDP0000863909
I
0.812
Ciclev10032777m.g
Citrus clementina
Ciclev10032777m.g
I
0.811
Cucsa.109420
Cucumis sativus
Cucsa.109420
I
0.811
PGSC0003DMG400001916
Solanum tuberosum
PGSC0003DMG400001916
I
0.811
Solyc04g005170.1
Solanum lycopersicum
Solyc04g005170.1
I
0.811
orange1.1g043159m.g
Citrus sinensis
orange1.1g043159m.g
I
0.811
POPTR_0014s00790
Populus trichocarpa
POPTR_0014s00790
N
0.809
Solyc03g043900.1
Solanum lycopersicum
Solyc03g043900.1
N
0.808
Eucgr.I02090
Eucalyptus grandis
Eucgr.I02090
I
0.808
ATBZIP42
Arabidopsis thaliana
AT3G30530
D
0.808
VIT_00s0541g00020
Vitis vinifera
VIT_00s0541g00020
N
0.807
mgf018661m
Mimulus guttatus
mgf018661m
N
0.807
GLYMA06G01240
Glycine max
GLYMA06G01240
I
0.807
Lus10040428.g
Linum usitatissimum
Lus10040428.g
I
0.806
Carubv10002068m.g
Capsella rubella
Carubv10002068m.g
I
0.806
MTR_8g015250
Medicago truncatula
MTR_8g015250
I
0.804
PK01815.1
Cannabis sativa
PK01815.1
N
0.804
Lus10024279.g
Linum usitatissimum
Lus10024279.g
N
0.804
Solyc01g109880.2
Solanum lycopersicum
Solyc01g109880.2
I
0.803
SapurV1A.0432s0050
Salix purpurea
SapurV1A.0432s0050
I
0.803
VIT_18s0001g13040
Vitis vinifera
VIT_18s0001g13040
N
0.802
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.802
Solyc03g046440.1
Solanum lycopersicum
Solyc03g046440.1
I
0.802
Cagra.6845s0027
Capsella grandiflora
Cagra.6845s0027
I
0.801
orange1.1g042014m.g
Citrus sinensis
orange1.1g042014m.g
I
0.801
Bra023540
Brassica rapa
Bra023540
I
0.801
Thhalv10015835m.g
Eutrema salsugineum
Thhalv10015835m.g
I
0.801
Bo9g163740
Brassica oleracea
Bo9g163740
I
0.801
Bra008670
Brassica rapa
Bra008670
I
0.801
Ciclev10013334m.g
Citrus clementina
Ciclev10013334m.g
I
0.801
Ca_01004
Cicer arietinum
Ca_01004
I
0.797
GSMUA_Achr11G20700_001
Musa acuminata
GSMUA_Achr11G20700_001
I
0.797
GSMUA_Achr2G06540_001
Musa acuminata
GSMUA_Achr2G06540_001
I
0.797
Bostr.2902s0318
Boechera stricta
Bostr.2902s0318
I
0.796
Bo2g012800
Brassica oleracea
Bo2g012800
I
0.796
AtbZIP3
Arabidopsis lyrata
fgenesh2_kg.6__1562__AT5G15830.1
I
0.796
POPTR_0017s14490
Populus trichocarpa
POPTR_0017s14490
I
0.795
MDP0000891899
Malus domestica
MDP0000891899
I
0.795
GLYMA04G01210
Glycine max
GLYMA04G01210
I
0.795
SapurV1A.0158s0220
Salix purpurea
SapurV1A.0158s0220
I
0.794
POPTR_0002s19720
Populus trichocarpa
POPTR_0002s19720
I
0.794
SapurV1A.3521s0020
Salix purpurea
SapurV1A.3521s0020
I
0.794
30076.m004659
Ricinus communis
30076.m004659
I
0.794
Ca_15971
Cicer arietinum
Ca_15971
N
0.793
AMTR_s00002p00268140
Amborella trichopoda
AMTR_s00002p00268140
I
0.793
GSMUA_Achr1G25340_001
Musa acuminata
GSMUA_Achr1G25340_001
I
0.793
GSMUA_Achr10G08670_001
Musa acuminata
GSMUA_Achr10G08670_001
I
0.793
Ciclev10002731m.g
Citrus clementina
Ciclev10002731m.g
N
0.792
orange1.1g041765m.g
Citrus sinensis
orange1.1g041765m.g
N
0.792
mgf021986m
Mimulus guttatus
mgf021986m
I
0.791
Bo3g010620
Brassica oleracea
Bo3g010620
I
0.791
gw1.83.117.1
Physcomitrella patens
gw1.83.117.1
I
0.791
Gorai.008G065300
Gossypium raimondii
Gorai.008G065300
I
0.791
Eucgr.G01645
Eucalyptus grandis
Eucgr.G01645
N
0.791
Eucgr.L01789
Eucalyptus grandis
Eucgr.L01789
N
0.791
PGSC0003DMG400007523
Solanum tuberosum
PGSC0003DMG400007523
I
0.791
mgf007535m
Mimulus guttatus
mgf007535m
I
0.789
PGSC0003DMG400003529
Solanum tuberosum
PGSC0003DMG400003529
I
0.789
PGSC0003DMG400005476
Solanum tuberosum
PGSC0003DMG400005476
N
0.789
mgf013074m
Mimulus guttatus
mgf013074m
I
0.789
Bra006324
Brassica rapa
Bra006324
I
0.789
Solyc02g084860.1
Solanum lycopersicum
Solyc02g084860.1
I
0.789
cassava23775.valid.m1
Manihot esculenta
cassava23775.valid.m1
I
0.789
Bo3g010750
Brassica oleracea
Bo3g010750
I
0.789
Gorai.012G155000
Gossypium raimondii
Gorai.012G155000
N
0.788
GSMUA_Achr9G14690_001
Musa acuminata
GSMUA_Achr9G14690_001
I
0.788
Cla008074
Citrullus lanatus
Cla008074
I
0.787
mgf004063m
Mimulus guttatus
mgf004063m
N
0.787
PDK_20s1417191g003
Phoenix dactylifera
PDK_20s1417191g003
I
0.786
Bra003500
Brassica rapa
Bra003500
I
0.786
Bo6g079450
Brassica oleracea
Bo6g079450
I
0.786
BZIP53
Arabidopsis thaliana
AT3G62420
D
0.786
Cagra.0483s0006
Capsella grandiflora
Cagra.0483s0006
I
0.786
ATBZIP53
Arabidopsis lyrata
fgenesh2_kg.5__2740__AT3G62420.1
I
0.786
Carubv10018852m.g
Capsella rubella
Carubv10018852m.g
I
0.786
Lus10006590.g
Linum usitatissimum
Lus10006590.g
I
0.786
Cla015037
Citrullus lanatus
Cla015037
I
0.786
Thhalv10006418m.g
Eutrema salsugineum
Thhalv10006418m.g
I
0.786
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
0.786
Traes_6DL_77ACE1279
Triticum aestivum
Traes_6DL_77ACE1279
I
0.785
MLOC_62430
Hordeum vulgare
MLOC_62430
I
0.785
Aquca_024_00067
Aquilegia coerulea
Aquca_024_00067
N
0.785
evm.TU.supercontig_53.3
Carica papaya
evm.TU.supercontig_53.3
N
0.785
Traes_6AL_E0ED0DE45
Triticum aestivum
Traes_6AL_E0ED0DE45
I
0.785
Bra039631
Brassica rapa
Bra039631
I
0.785
OPUNC02G28720
Oryza punctata
OPUNC02G28720
I
0.784
ORGLA02G0265300
Oryza glaberrima
ORGLA02G0265300
I
0.784
ORUFI02G32700
Oryza rufipogon
ORUFI02G32700
I
0.784
OS02G0728001
Oryza sativa
OS02G0728001
D
0.784
ONIVA02G34180
Oryza nivara
ONIVA02G34180
I
0.784
OGLUM02G31690
Oryza glumaepatula
OGLUM02G31690
I
0.784
OBART02G31030
Oryza barthii
OBART02G31030
I
0.784
OMERI02G29910
Oryza meridionalis
OMERI02G29910
I
0.784
BGIOSGA008968
Oryza indica
BGIOSGA008968
I
0.784
OLONG_004835
Oryza longistaminata
OLONG_004835
I
0.784
Bo8g097830
Brassica oleracea
Bo8g097830
I
0.783
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
0.783
Cucsa.043170
Cucumis sativus
Cucsa.043170
N
0.783
Traes_5DL_591F8EFBD
Triticum aestivum
Traes_5DL_591F8EFBD
I
0.783
Ca_17416
Cicer arietinum
Ca_17416
I
0.783
Traes_5BL_C559EFC8A
Triticum aestivum
Traes_5BL_C559EFC8A
I
0.783
Bra007679
Brassica rapa
Bra007679
I
0.783
Aquca_022_00003
Aquilegia coerulea
Aquca_022_00003
I
0.782
Aquca_003_00556
Aquilegia coerulea
Aquca_003_00556
I
0.782