Gorai.005G259700 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.005G259700 T071923_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.784 0.547
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.785 0.692
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.785 0.692
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.786 0.547
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.786 0.547
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G259700.1 bZIP 211 277
Gorai.005G259700.2 bZIP 211 274
Gorai.005G259700.3 bZIP 211 265
Gorai.005G259700.4 bZIP 211 245
Gorai.005G259700.5 bZIP 211 241
Gorai.005G259700.6 bZIP 211 263

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000706379 Malus domestica MDP0000706379 I 0.861
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.861
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.861
TCM_006432 Theobroma cacao TCM_006432 I 0.861
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.859
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I 0.850
mgf009464m Mimulus guttatus mgf009464m N 0.850
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I 0.850
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.844
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.836
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N 0.834
MDP0000198495 Malus domestica MDP0000198495 I 0.827
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.826
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.826
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.825
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.825
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.825
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.825
OB01G46760 Oryza brachyantha OB01G46760 I 0.825
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.825
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.825
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.825
OBART01G37980 Oryza barthii OBART01G37980 I 0.825
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.825
OS01G0859300 Oryza sativa OS01G0859300 I 0.825
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.825
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.825
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I 0.824
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.824
Pm004043 Prunus mume Pm004043 I 0.824
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I 0.824
Cla000389 Citrullus lanatus Cla000389 I 0.823
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.823
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.823
F775_32479 Aegilops tauschii F775_32479 I 0.823
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.823
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I 0.822
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.820
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.820
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.820
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.820
PGSC0003DMG400023897 Solanum tuberosum PGSC0003DMG400023897 N 0.817
29955.m001177 Ricinus communis 29955.m001177 I 0.816
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.813
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.811
chr6.CM0314.840.nd Lotus japonicus chr6.CM0314.840.nd N 0.810
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.807
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.806
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.805
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.805
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.805
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.804
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.803
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.803
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.803
Bra015281 Brassica rapa Bra015281 N 0.802
MDP0000208334 Malus domestica MDP0000208334 N 0.802
Bo5g004230 Brassica oleracea Bo5g004230 N 0.802
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.802
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.801
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.801
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.800
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.799
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.799
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.799
Bra014668 Brassica rapa Bra014668 I 0.799
Bo4g112690 Brassica oleracea Bo4g112690 I 0.799
Bra007274 Brassica rapa Bra007274 I 0.799
Bra007276 Brassica rapa Bra007276 I 0.799
Bo8g091160 Brassica oleracea Bo8g091160 I 0.799
Bo6g072380 Brassica oleracea Bo6g072380 I 0.799
Bra003253 Brassica rapa Bra003253 I 0.799
TCM_000152 Theobroma cacao TCM_000152 I 0.798
gene14556-v1.0-hybrid Fragaria vesca gene14556-v1.0-hybrid I 0.798
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.796
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.794
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.794
OS03G0322700 Oryza sativa OS03G0322700 I 0.792
Bo7g067030 Brassica oleracea Bo7g067030 N 0.792
GLYMA15G05440 Glycine max GLYMA15G05440 N 0.792
GLYMA08G19590 Glycine max GLYMA08G19590 N 0.792
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.792
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.792
GBF4 Arabidopsis thaliana AT1G03970 N 0.792
TCM_044596 Theobroma cacao TCM_044596 I 0.791
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.790
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.790
mgf011003m Mimulus guttatus mgf011003m I 0.790
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.790
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.790
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.790
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.790
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.790
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.790
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.790
mgf002556m Mimulus guttatus mgf002556m I 0.790
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.790
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.790
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.790
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.789
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.789
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.789
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.789
mgf020385m Mimulus guttatus mgf020385m N 0.789
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.788
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.788
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.788
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.788
BGIOSGA026419 Oryza indica BGIOSGA026419 I 0.788
Bra016953 Brassica rapa Bra016953 I 0.788
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.788
Si002173m.g Setaria italica Si002173m.g I 0.788
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I 0.788
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.788
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.788
ONIVA07G26520 Oryza nivara ONIVA07G26520 I 0.788
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I 0.788
OB07G32300 Oryza brachyantha OB07G32300 I 0.788
OPUNC07G25180 Oryza punctata OPUNC07G25180 I 0.788
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I 0.788
OMERI07G23410 Oryza meridionalis OMERI07G23410 I 0.788
OBART07G26790 Oryza barthii OBART07G26790 I 0.788
Pavir.J38875 Panicum virgatum Pavir.J38875 I 0.788
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.788
DPBF3 Arabidopsis thaliana AT3G56850 D 0.788
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.788
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.788
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I 0.788
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.788
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.788
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.788
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.788
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.788
OS07G0686100 Oryza sativa OS07G0686100 I 0.788
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.788
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I 0.788
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.788
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.787
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.787
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I 0.787
OB05G28440 Oryza brachyantha OB05G28440 I 0.787
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.787
Ca_23748 Cicer arietinum Ca_23748 I 0.787
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.787
OBART05G21000 Oryza barthii OBART05G21000 I 0.787
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.787
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.787
MDP0000215106 Malus domestica MDP0000215106 I 0.787
MDP0000273211 Malus domestica MDP0000273211 I 0.787
F775_17024 Aegilops tauschii F775_17024 I 0.787
OS05G0489700 Oryza sativa OS05G0489700 I 0.787
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.787
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.787
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.787
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.787
F775_28711 Aegilops tauschii F775_28711 I 0.787
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.787
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.787
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.787
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.787
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I 0.786
Carubv10018770m.g Capsella rubella Carubv10018770m.g I 0.786
BGIOSGA010835 Oryza indica BGIOSGA010835 I 0.786
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.786
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I 0.786
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I 0.786
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I 0.786
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I 0.786
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.786
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I 0.786
Sb02g043620 Sorghum bicolor Sb02g043620 I 0.786
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.786
MTR_2g086390 Medicago truncatula MTR_2g086390 N 0.786
MTR_3g010660 Medicago truncatula MTR_3g010660 I 0.786
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I 0.786
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I 0.786
ONIVA03G16560 Oryza nivara ONIVA03G16560 I 0.786
OPUNC01G33790 Oryza punctata OPUNC01G33790 I 0.786
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I 0.786
OMERI03G14020 Oryza meridionalis OMERI03G14020 I 0.786
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I 0.786
F775_31964 Aegilops tauschii F775_31964 I 0.786
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I 0.786
GRMZM2G077124 Zea mays GRMZM2G077124 I 0.786
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I 0.786
Pm016826 Prunus mume Pm016826 I 0.786
30226.m002055 Ricinus communis 30226.m002055 I 0.786
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.786
Ca_08143 Cicer arietinum Ca_08143 I 0.786
Cla013878 Citrullus lanatus Cla013878 I 0.786
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.786
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I 0.786
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.786
TRIUR3_06726 Triticum urartu TRIUR3_06726 I 0.786
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.786
TRIUR3_12792 Triticum urartu TRIUR3_12792 I 0.786
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.785
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.785
OB01G43630 Oryza brachyantha OB01G43630 I 0.785
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.785
F775_19301 Aegilops tauschii F775_19301 I 0.785
Traes_3DL_E21790878 Triticum aestivum Traes_3DL_E21790878 I 0.785
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I 0.785
Si022639m.g Setaria italica Si022639m.g I 0.784
OS01G0813100 Oryza sativa OS01G0813100 I 0.784
MDP0000740787 Malus domestica MDP0000740787 I 0.784
BGIOSGA000613 Oryza indica BGIOSGA000613 I 0.784
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.783
mgf015092m Mimulus guttatus mgf015092m I 0.783
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.783
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I 0.783
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I 0.783
ONIVA01G39770 Oryza nivara ONIVA01G39770 I 0.783
OMERI01G32080 Oryza meridionalis OMERI01G32080 I 0.783
OLONG_002030 Oryza longistaminata OLONG_002030 I 0.783
OBART01G34790 Oryza barthii OBART01G34790 I 0.783
Si001731m.g Setaria italica Si001731m.g I 0.782
Pm001315 Prunus mume Pm001315 I 0.782
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.782