CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G229500
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.006G229500
T071931_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.899
0.903
AT1G06070
M06744_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_col_a
0.894
0.871
AT1G06070
M06745_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a
0.894
0.871
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G229500.1
bZIP
214
275
DPKRAKRIWANRQSAARSKERKMRYIAELERKIQTLQTEATSLAAQLTLLQRDSSGMSAENS
Gorai.006G229500.2
bZIP
214
275
DPKRAKRIWANRQSAARSKERKMRYIAELERKIQTLQTEATSLAAQLTLLQRDSSGMSAENS
Gorai.006G229500.3
bZIP
214
275
DPKRAKRIWANRQSAARSKERKMRYIAELERKIQTLQTEATSLAAQLTLLQRDSSGMSAENS
Gorai.006G229500.4
bZIP
214
275
DPKRAKRIWANRQSAARSKERKMRYIAELERKIQTLQTEATSLAAQLTLLQRDSSGMSAENS
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy