Gorai.009G301200 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.009G301200 T071968_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.820 0.786
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.820 0.786
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.820 0.786
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.820 0.786
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.820 0.786
PK24978.1
M01162_2.00
Cannabis sativa
NNNCACGTRTHNNNN

NNNNDAYACGTGNNN
PBM
Lambert et al.(2019)
pTH10153
0.788 0.661
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.786 0.607
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.786 0.607
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G301200.1 bZIP 247 302
Gorai.009G301200.2 bZIP 247 302
Gorai.009G301200.3 bZIP 247 302
Gorai.009G301200.4 bZIP 247 302
Gorai.009G301200.5 bZIP 247 302

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

302 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30148.m001468 Ricinus communis 30148.m001468 N 0.000
AMTR_s00011p00266100 Amborella trichopoda AMTR_s00011p00266100 N 0.000
Aquca_052_00048 Aquilegia coerulea Aquca_052_00048 N 0.000
Bo2g097550 Brassica oleracea Bo2g097550 N 0.000
Bostr.10180s0008 Boechera stricta Bostr.10180s0008 N 0.000
Bra008513 Brassica rapa Bra008513 N 0.000
BRADI3G16040 Brachypodium distachyon BRADI3G16040 N 0.000
Cagra.2194s0001 Capsella grandiflora Cagra.2194s0001 N 0.000
Carubv10020145m.g Capsella rubella Carubv10020145m.g N 0.000
cassava13701.valid.m1 Manihot esculenta cassava13701.valid.m1 N 0.000
cassava13702.valid.m1 Manihot esculenta cassava13702.valid.m1 N 0.000
cassava41980.valid.m1 Manihot esculenta cassava41980.valid.m1 N 0.000
Ca_22622 Cicer arietinum Ca_22622 N 0.000
Ca_22625 Cicer arietinum Ca_22625 N 0.000
chr3.CM0127.660.nc Lotus japonicus chr3.CM0127.660.nc N 0.000
Ciclev10031289m.g Citrus clementina Ciclev10031289m.g N 0.000
Cla006897 Citrullus lanatus Cla006897 N 0.000
Cucsa.073340 Cucumis sativus Cucsa.073340 N 0.000
Eucgr.A02994 Eucalyptus grandis Eucgr.A02994 N 0.000
evm.TU.supercontig_3807.1 Carica papaya evm.TU.supercontig_3807.1 N 0.000
gene12547-v1.0-hybrid Fragaria vesca gene12547-v1.0-hybrid N 0.000
GLYMA09G35750 Glycine max GLYMA09G35750 N 0.000
GLYMA12G01600 Glycine max GLYMA12G01600 N 0.000
Gorai.004G255000 Gossypium raimondii Gorai.004G255000 N 0.000
Gorai.007G247500 Gossypium raimondii Gorai.007G247500 N 0.000
GSMUA_Achr11G08010_001 Musa acuminata GSMUA_Achr11G08010_001 N 0.000
GSMUA_Achr1G10700_001 Musa acuminata GSMUA_Achr1G10700_001 N 0.000
Lus10020365.g Linum usitatissimum Lus10020365.g N 0.000
MDP0000934360 Malus domestica MDP0000934360 N 0.000
MDP0000939377 Malus domestica MDP0000939377 N 0.000
mgf004750m Mimulus guttatus mgf004750m N 0.000
mgf016433m Mimulus guttatus mgf016433m N 0.000
MTR_0172s0030 Medicago truncatula MTR_0172s0030 N 0.000
orange1.1g010521m.g Citrus sinensis orange1.1g010521m.g N 0.000
PDK_20s1319221g002 Phoenix dactylifera PDK_20s1319221g002 N 0.000
PGSC0003DMG400026491 Solanum tuberosum PGSC0003DMG400026491 N 0.000
PGSC0003DMG400027038 Solanum tuberosum PGSC0003DMG400027038 N 0.000
PK03826.1 Cannabis sativa PK03826.1 N 0.000
Pm019567 Prunus mume Pm019567 N 0.000
POPTR_0013s07290 Populus trichocarpa POPTR_0013s07290 N 0.000
POPTR_0019s06020 Populus trichocarpa POPTR_0019s06020 N 0.000
PRUPE_ppa004393mg Prunus persica PRUPE_ppa004393mg N 0.000
SapurV1A.0592s0030 Salix purpurea SapurV1A.0592s0030 N 0.000
SapurV1A.1326s0010 Salix purpurea SapurV1A.1326s0010 N 0.000
SapurV1A.1456s0040 Salix purpurea SapurV1A.1456s0040 N 0.000
SIGA Arabidopsis lyrata scaffold_200883.1 N 0.000
SIGA Vitis vinifera VIT_16s0039g00660 N 0.000
SIGA Arabidopsis thaliana AT1G64860 N 0.000
Solyc03g097320.2 Solanum lycopersicum Solyc03g097320.2 N 0.000
Solyc06g072710.2 Solanum lycopersicum Solyc06g072710.2 N 0.000
TCM_025640 Theobroma cacao TCM_025640 N 0.000
Thhalv10002486m.g Eutrema salsugineum Thhalv10002486m.g N 0.000
Traes_7BL_0D553E505 Triticum aestivum Traes_7BL_0D553E505 N 0.000