CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G258300
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.013G258300
T071996_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.801
0.557
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G258300.1
bZIP
280
344
ERRQRRMIKNRESAARSRARRQAYTVELELELNQLKRENAKLKQLVEENDKRRKEEVLKRKKELT
Gorai.013G258300.2
bZIP
280
344
ERRQRRMIKNRESAARSRARRQAYTVELELELNQLKRENAKLKQLQEENDKRRKEEVLKRKKELT
Gorai.013G258300.3
bZIP
280
343
ERRQRRMIKNRESAARSRARRQAYTVELELELNQLKRENAKLKQLEENDKRRKEEVLKRKKELT
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA002866
Anopheles arabiensis
AARA002866
I
0.000
ACHR005921
Anopheles christyi
ACHR005921
I
0.000
AFUN004907
Anopheles funestus
AFUN004907
I
0.000
Alligator_sinensis_CCG000599.1
Alligator sinensis
Alligator_sinensis_CCG000599.1
I
0.000
ASTEI11507
Anopheles stephensi
ASTEI11507
I
0.000
EBF1
Choloepus hoffmanni
ENSCHOG00000012303
N
0.000
Ebf1
Rattus norvegicus
ENSRNOG00000028845
I
0.000
ENSAMXG00000002783
Astyanax mexicanus
ENSAMXG00000002783
I
0.000
ENSAMXG00000012646
Astyanax mexicanus
ENSAMXG00000012646
I
0.000
GH25280
Drosophila grimshawi
FBgn0132735
I
0.000
HelroG147258
Helobdella robusta
HelroG147258
I
0.000
LCUP013861
Lucilia cuprina
LCUP013861
I
0.000
MESCA011260
Megaselia scalaris
MESCA011260
I
0.000