CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000234166
(
Malus domestica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
MDP0000234166
T072162_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.807
0.918
AT1G06070
M06744_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_col_a
0.807
0.918
AT1G06070
M06745_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a
0.807
0.918
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000234166
bZIP
257
305
RWIWANRQSAARSKERKMRYIAELEQKVQTLQTEATSLSAQLTLLQRDA
Links
Other
bZIP
family TFs
Other
Malus domestica
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava43164.valid.m1
Manihot esculenta
cassava43164.valid.m1
I
0.807
Cucsa.062530
Cucumis sativus
Cucsa.062530
I
0.807
Cucsa.251880
Cucumis sativus
Cucsa.251880
I
0.807
cassava32399.m1
Manihot esculenta
cassava32399.m1
I
0.807
Cla022204
Citrullus lanatus
Cla022204
I
0.807
Ca_02692
Cicer arietinum
Ca_02692
I
0.807
AT1G06070
Arabidopsis thaliana
AT1G06070
D
0.807
Bostr.25219s0353
Boechera stricta
Bostr.25219s0353
I
0.807
Cagra.1671s0236
Capsella grandiflora
Cagra.1671s0236
I
0.807
Thhalv10007692m.g
Eutrema salsugineum
Thhalv10007692m.g
I
0.807
PK20942.1
Cannabis sativa
PK20942.1
D
0.807
chr3.CM0106.340.nd
Lotus japonicus
chr3.CM0106.340.nd
I
0.807
Lus10008150.g
Linum usitatissimum
Lus10008150.g
I
0.807
Gorai.006G229500
Gossypium raimondii
Gorai.006G229500
I
0.807
Carubv10008993m.g
Capsella rubella
Carubv10008993m.g
I
0.807
gene23487-v1.0-hybrid
Fragaria vesca
gene23487-v1.0-hybrid
I
0.807
VIT_05s0102g01120
Vitis vinifera
VIT_05s0102g01120
I
0.807
Cla022201
Citrullus lanatus
Cla022201
I
0.807
TCM_019998
Theobroma cacao
TCM_019998
I
0.807
GLYMA12G05520
Glycine max
GLYMA12G05520
I
0.807
GLYMA11G13510
Glycine max
GLYMA11G13510
I
0.807
Bo8g005940
Brassica oleracea
Bo8g005940
I
0.807
GLYMA15G03350
Glycine max
GLYMA15G03350
I
0.807
GLYMA13G42030
Glycine max
GLYMA13G42030
I
0.807
scaffold_100594.1
Arabidopsis lyrata
scaffold_100594.1
I
0.807
POPTR_0017s05610
Populus trichocarpa
POPTR_0017s05610
I
0.807
Gorai.005G015900
Gossypium raimondii
Gorai.005G015900
I
0.805
MDP0000435971
Malus domestica
MDP0000435971
I
0.803
Pm007522
Prunus mume
Pm007522
I
0.803
Lus10019376.g
Linum usitatissimum
Lus10019376.g
I
0.799
Bra015471
Brassica rapa
Bra015471
I
0.795
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.795
Bo5g007170
Brassica oleracea
Bo5g007170
I
0.795
Bra030637
Brassica rapa
Bra030637
I
0.795
Solyc06g053350.2
Solanum lycopersicum
Solyc06g053350.2
I
0.795
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.793
RF2A
Oryza sativa
OS09G0516200
I
0.793
OB09G23080
Oryza brachyantha
OB09G23080
I
0.793
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.793
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.793
Gorai.011G140400
Gossypium raimondii
Gorai.011G140400
I
0.792