CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g025985m.g
(
Citrus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
orange1.1g025985m.g
T072266_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LOC_Os05g36160
M01825_2.00
Oryza sativa
MCACGTGK
MCACGTGK
PBM
Weirauch et al.(2014)
pTH8599
0.789
0.686
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g025985m
bZIP
161
224
KAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKAERTKERYKQLMEKV
orange1.1g027587m
bZIP
161
211
KAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKVI
orange1.1g029519m
bZIP
161
190
KAAQQRQRRMIKNRESAARSRERKQVTKLC
Links
Other
bZIP
family TFs
Other
Citrus sinensis
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10002059m.g
Citrus clementina
Ciclev10002059m.g
I
0.880
TCM_035623
Theobroma cacao
TCM_035623
N
0.880
Cucsa.363740
Cucumis sativus
Cucsa.363740
I
0.879
evm.TU.supercontig_21.207
Carica papaya
evm.TU.supercontig_21.207
N
0.865
Ca_04375
Cicer arietinum
Ca_04375
N
0.864
VIT_18s0072g00470
Vitis vinifera
VIT_18s0072g00470
N
0.864
PK16522.1
Cannabis sativa
PK16522.1
N
0.860
mgf008848m
Mimulus guttatus
mgf008848m
N
0.859
Gorai.005G078500
Gossypium raimondii
Gorai.005G078500
N
0.853
chr5.CM0052.120.nc
Lotus japonicus
chr5.CM0052.120.nc
N
0.852
fgenesh2_kg.1__328__AT1G03970.1
Arabidopsis lyrata
fgenesh2_kg.1__328__AT1G03970.1
N
0.850
GBF4
Arabidopsis thaliana
AT1G03970
N
0.850
Carubv10011573m.g
Capsella rubella
Carubv10011573m.g
N
0.842
Cagra.1671s0014
Capsella grandiflora
Cagra.1671s0014
N
0.842
Bostr.26675s0358
Boechera stricta
Bostr.26675s0358
N
0.840
SapurV1A.0625s0150
Salix purpurea
SapurV1A.0625s0150
I
0.827
Thhalv10009710m.g
Eutrema salsugineum
Thhalv10009710m.g
N
0.827
POPTR_0005s21500
Populus trichocarpa
POPTR_0005s21500
I
0.827
POPTR_0002s06800
Populus trichocarpa
POPTR_0002s06800
I
0.827
SapurV1A.0134s0060
Salix purpurea
SapurV1A.0134s0060
I
0.827
Bra015281
Brassica rapa
Bra015281
N
0.826
Bo5g004230
Brassica oleracea
Bo5g004230
N
0.826
AMTR_s00040p00057740
Amborella trichopoda
AMTR_s00040p00057740
I
0.822
PK22350.1
Cannabis sativa
PK22350.1
N
0.821
cassava12750.valid.m1
Manihot esculenta
cassava12750.valid.m1
I
0.821
SapurV1A.5129s0010
Salix purpurea
SapurV1A.5129s0010
I
0.821
gene08154-v1.0-hybrid
Fragaria vesca
gene08154-v1.0-hybrid
N
0.820
mgf015540m
Mimulus guttatus
mgf015540m
I
0.820
Solyc04g071510.2
Solanum lycopersicum
Solyc04g071510.2
I
0.820
Lus10028575.g
Linum usitatissimum
Lus10028575.g
N
0.818
Pm022545
Prunus mume
Pm022545
I
0.818
Bo7g067030
Brassica oleracea
Bo7g067030
N
0.815
MDP0000208334
Malus domestica
MDP0000208334
N
0.814
Pavir.Ea03718
Panicum virgatum
Pavir.Ea03718
I
0.813
Si003247m.g
Setaria italica
Si003247m.g
I
0.813
GRMZM5G858197
Zea mays
GRMZM5G858197
I
0.813
Sb03g040970
Sorghum bicolor
Sb03g040970
I
0.813
29863.m001047
Ricinus communis
29863.m001047
N
0.812
Al_scaffold_0007_1421
Arabidopsis lyrata
Al_scaffold_0007_1421
N
0.811
scaffold_105455.1
Arabidopsis lyrata
scaffold_105455.1
N
0.811
MTR_1g098590
Medicago truncatula
MTR_1g098590
N
0.809
GLYMA10G36820
Glycine max
GLYMA10G36820
N
0.808
VIT_12s0055g00420
Vitis vinifera
VIT_12s0055g00420
I
0.808
Thhalv10003246m.g
Eutrema salsugineum
Thhalv10003246m.g
N
0.807
Cla014026
Citrullus lanatus
Cla014026
N
0.806
Carubv10027647m.g
Capsella rubella
Carubv10027647m.g
N
0.803
fgenesh2_kg.8__404__AT5G44080.1
Arabidopsis lyrata
fgenesh2_kg.8__404__AT5G44080.1
N
0.803
AT5G44080
Arabidopsis thaliana
AT5G44080
N
0.803
Bostr.3148s0051
Boechera stricta
Bostr.3148s0051
N
0.803
OBART05G17920
Oryza barthii
OBART05G17920
I
0.801
MLOC_64571
Hordeum vulgare
MLOC_64571
I
0.800
BRADI2G56096
Brachypodium distachyon
BRADI2G56096
I
0.800
Cagra.12696s0002
Capsella grandiflora
Cagra.12696s0002
N
0.797
29955.m001177
Ricinus communis
29955.m001177
I
0.797
Pavir.J05659
Panicum virgatum
Pavir.J05659
I
0.797
GSMUA_Achr3G22470_001
Musa acuminata
GSMUA_Achr3G22470_001
I
0.793
ORUFI05G19090
Oryza rufipogon
ORUFI05G19090
I
0.791
ONIVA05G18780
Oryza nivara
ONIVA05G18780
I
0.791
BGIOSGA019930
Oryza indica
BGIOSGA019930
I
0.791
GLYMA08G08220
Glycine max
GLYMA08G08220
N
0.790
LPERR05G14180
Leersia perrieri
LPERR05G14180
I
0.789
OMERI05G15500
Oryza meridionalis
OMERI05G15500
I
0.789
ORGLA05G0154900
Oryza glaberrima
ORGLA05G0154900
I
0.789
OGLUM05G18920
Oryza glumaepatula
OGLUM05G18920
I
0.789
OB05G25740
Oryza brachyantha
OB05G25740
I
0.789
OS05G0437700
Oryza sativa
OS05G0437700
I
0.789
LOC_Os05g36160
Oryza sativa
LOC_Os05g36160
D
0.789
TRAES3BF019000220CFD_g
Triticum aestivum
TRAES3BF019000220CFD_g
I
0.788
Aquca_023_00151
Aquilegia coerulea
Aquca_023_00151
I
0.787
MTR_4g094390
Medicago truncatula
MTR_4g094390
I
0.787
OPUNC05G15820
Oryza punctata
OPUNC05G15820
I
0.785