CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g029952m.g
(
Citrus sinensis
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
orange1.1g029952m.g
T072269_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.809
0.532
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.809
0.532
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN
NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.786
0.565
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG
CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.786
0.565
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g029952m
bZIP
76
137
DERKRRRMISNRESARRSRMRKQKHLENLRNQLNRLRMENRELSNRLRFALHHCQRVRTDND
Links
Other
bZIP
family TFs
Other
Citrus sinensis
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy