CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa03364
(
Panicum virgatum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Pavir.Aa03364
T072302_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0266800
M10046_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.884
0.984
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.833
0.683
CPRF2_PETCR
M10069_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_01
0.795
0.619
CPRF2_PETCR
M10070_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF2_Q2
0.795
0.619
estExt_Genewise1.C_2060077
M01832_2.00
Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN
PBM
Weirauch et al.(2014)
pTH8666
0.789
0.571
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa03364.1.p
bZIP
142
218
QDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTDNRILKSDVEALRVKVK
Pavir.Aa03364.2.p
bZIP
141
217
QDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTDNRILKSDVEALRVKVK
Pavir.Aa03364.3.p
bZIP
140
216
QDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQFTTAVTDNRILKSDVEALRVKVK
Links
Other
bZIP
family TFs
Other
Panicum virgatum
TFs
186 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy